Initiating a crystallographic study of UDP-galactopyranose mutase from Escherichia coli
- PMID: 10089346
- DOI: 10.1107/s0907444998010877
Initiating a crystallographic study of UDP-galactopyranose mutase from Escherichia coli
Erratum in
- Acta Crystallogr D Biol Crystallogr 1999 May;55(5):1108
Abstract
UDP-galactopyranose mutase, the enzyme responsible for the conversion of UDP-galactopyranose to UDP-galactofuranose, has been crystallized in a form suitable for X-ray diffraction studies. UDP-galactofuranose is a key component of mycobacterial cell walls. Crystals of both the native protein and a selenomethionine variant have been grown by the vapour-diffusion method in hanging drops, and diffract to beyond 3.0 A using synchrotron radiation. Equilibration was against a solution of 20%(w/v) polyethylene glycol (4K), 12%(v/v) 2--propanol, 0.1 M HEPES pH 7.6 at 293.5 K. Crystals grow as thin plates of dimensions 0.4 x 0.2 x approximately 0.02 mm. They are monoclinic [corrected], space group P21, with unit-cell dimensions a = 71. 12, b = 58.42, c = 96.38 A, beta = 96.38 degrees. 92% (native) and 94% (selenomethionine) complete data sets have been recorded to 2.9 A (Rmerge = 5.0%) and 3.0 A (Rmerge = 6.9%), respectively. The Matthews coefficient is 2.35 A3 Da-1 for a dimer in the asymmetric unit, the solvent content being 47%. Diffraction data have also been recorded on a putative platinum derivative to 3.5 A.
Similar articles
-
Targeting UDP-galactopyranose mutases from eukaryotic human pathogens.Curr Pharm Des. 2013;19(14):2561-73. doi: 10.2174/1381612811319140007. Curr Pharm Des. 2013. PMID: 23116395 Free PMC article. Review.
-
Structure, mechanism, and dynamics of UDP-galactopyranose mutase.Arch Biochem Biophys. 2014 Feb 15;544:128-41. doi: 10.1016/j.abb.2013.09.017. Epub 2013 Oct 3. Arch Biochem Biophys. 2014. PMID: 24096172 Free PMC article. Review.
-
UDP-galactopyranose mutase has a novel structure and mechanism.Nat Struct Biol. 2001 Oct;8(10):858-63. doi: 10.1038/nsb1001-858. Nat Struct Biol. 2001. PMID: 11573090
-
Expression, purification and preliminary X-ray crystallographic analysis of UDP-galactopyranose mutase from Deinococcus radiodurans.Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Aug 1;65(Pt 8):843-5. doi: 10.1107/S1744309109027754. Epub 2009 Jul 30. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009. PMID: 19652355 Free PMC article.
-
Galactofuranose biosynthesis in Escherichia coli K-12: identification and cloning of UDP-galactopyranose mutase.J Bacteriol. 1996 Feb;178(4):1047-52. doi: 10.1128/jb.178.4.1047-1052.1996. J Bacteriol. 1996. PMID: 8576037 Free PMC article.
Cited by
-
Cell wall core galactofuran synthesis is essential for growth of mycobacteria.J Bacteriol. 2001 Jul;183(13):3991-8. doi: 10.1128/JB.183.13.3991-3998.2001. J Bacteriol. 2001. PMID: 11395463 Free PMC article.
-
Targeting UDP-galactopyranose mutases from eukaryotic human pathogens.Curr Pharm Des. 2013;19(14):2561-73. doi: 10.2174/1381612811319140007. Curr Pharm Des. 2013. PMID: 23116395 Free PMC article. Review.
-
Drug targeting Mycobacterium tuberculosis cell wall synthesis: development of a microtiter plate-based screen for UDP-galactopyranose mutase and identification of an inhibitor from a uridine-based library.Antimicrob Agents Chemother. 2003 Jan;47(1):378-82. doi: 10.1128/AAC.47.1.378-382.2003. Antimicrob Agents Chemother. 2003. PMID: 12499218 Free PMC article.
-
Structure, mechanism, and dynamics of UDP-galactopyranose mutase.Arch Biochem Biophys. 2014 Feb 15;544:128-41. doi: 10.1016/j.abb.2013.09.017. Epub 2013 Oct 3. Arch Biochem Biophys. 2014. PMID: 24096172 Free PMC article. Review.
-
Crystal structures of Mycobacteria tuberculosis and Klebsiella pneumoniae UDP-galactopyranose mutase in the oxidised state and Klebsiella pneumoniae UDP-galactopyranose mutase in the (active) reduced state.J Mol Biol. 2005 May 13;348(4):971-82. doi: 10.1016/j.jmb.2005.02.057. J Mol Biol. 2005. PMID: 15843027 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Molecular Biology Databases