Review
doi: 10.1016/S1369-5274(99)80056-3.
Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products
Affiliations
- PMID: 10383864
- DOI: 10.1016/S1369-5274(99)80056-3
Item in Clipboard
Review
Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products
Curr Opin Microbiol.
1999 Jun.
Abstract
Terminal restriction fragment length polymorphism is a recent molecular approach that can assess subtle genetic differences between strains as well as provide insight into the structure and function of microbial communities. The technique has both high sensitivity and throughput making it ideal for comparative analyses.
Similar articles
-
Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities.Appl Microbiol Biotechnol. 2008 Sep;80(3):365-80. doi: 10.1007/s00253-008-1565-4. Epub 2008 Jul 22. Appl Microbiol Biotechnol. 2008. PMID: 18648804 Review.
-
Evaluation of terminal-restriction fragment length polymorphism analysis in contrasting marine environments.FEMS Microbiol Ecol. 2008 Jul;65(1):169-78. doi: 10.1111/j.1574-6941.2008.00493.x. Epub 2008 May 22. FEMS Microbiol Ecol. 2008. PMID: 18503550
-
Post-amplification Klenow fragment treatment alleviates PCR bias caused by partially single-stranded amplicons.J Microbiol Methods. 2005 Apr;61(1):69-75. doi: 10.1016/j.mimet.2004.11.002. J Microbiol Methods. 2005. PMID: 15676197
-
Reliability for detecting composition and changes of microbial communities by T-RFLP genetic profiling.FEMS Microbiol Ecol. 2008 Feb;63(2):249-60. doi: 10.1111/j.1574-6941.2007.00427.x. Epub 2008 Jan 2. FEMS Microbiol Ecol. 2008. PMID: 18177353
-
Genetic analysis of nuclear DNA restriction fragment patterns.Genome. 1991 Oct;34(5):693-703. doi: 10.1139/g91-107. Genome. 1991. PMID: 1683328 Review.
Cited by
-
Community structure analyses are more sensitive to differences in soil bacterial communities than anonymous diversity indices.Appl Environ Microbiol. 2006 Dec;72(12):7804-12. doi: 10.1128/AEM.01464-06. Epub 2006 Oct 13. Appl Environ Microbiol. 2006. PMID: 17041161 Free PMC article.
-
Fluorescent heteroduplex assay for monitoring Bacillus anthracis and close relatives in environmental samples.Appl Environ Microbiol. 2003 Jun;69(6):3317-26. doi: 10.1128/AEM.69.6.3317-3326.2003. Appl Environ Microbiol. 2003. PMID: 12788732 Free PMC article.
-
Impacts of Binary Oxide Nanoparticles on the Soybean Plant and Its Rhizosphere, Associated Phytohormones, and Enzymes.Molecules. 2023 Jan 30;28(3):1326. doi: 10.3390/molecules28031326. Molecules. 2023. PMID: 36770994 Free PMC article. Review.
-
Effect of environmental factors and influence of rumen and hindgut biogeography on bacterial communities in steers.Appl Environ Microbiol. 2011 Jan;77(1):258-68. doi: 10.1128/AEM.01289-09. Epub 2010 Nov 12. Appl Environ Microbiol. 2011. PMID: 21075877 Free PMC article.
-
Evaluation of antiviral resistant hepatitis B virus subpopulations in patients with chronic hepatitis B by using terminal restriction fragment length polymorphism.Virusdisease. 2015 Dec;26(4):267-75. doi: 10.1007/s13337-015-0282-8. Epub 2015 Oct 29. Virusdisease. 2015. PMID: 26645037 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
