Tertiary Motifs in RNA Structure and Folding
- PMID: 10458781
- DOI: 10.1002/(sici)1521-3773(19990816)38:16<2326::aid-anie2326>3.0.co;2-3
Tertiary Motifs in RNA Structure and Folding
Abstract
Specific tertiary structural motifs determine the complete architecture of RNA molecules (see picture for examples). Within the last few years a number of high-resolution crystal structures of complex RNAs have led to new insights into the mechanisms by which these complex folds are attained. In this review the structures of these tertiary motifs and how they influence the folding pathway of biological RNAs are discussed, as well as new developments in modeling RNA structure based upon these findings.
Similar articles
-
The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks.Acc Chem Res. 2011 Dec 20;44(12):1302-11. doi: 10.1021/ar200098t. Epub 2011 Sep 7. Acc Chem Res. 2011. PMID: 21899297
-
Kinetic and thermodynamic framework for P4-P6 RNA reveals tertiary motif modularity and modulation of the folding preferred pathway.Proc Natl Acad Sci U S A. 2016 Aug 23;113(34):E4956-65. doi: 10.1073/pnas.1525082113. Epub 2016 Aug 4. Proc Natl Acad Sci U S A. 2016. PMID: 27493222 Free PMC article.
-
Bridging the gap between in vitro and in vivo RNA folding.Q Rev Biophys. 2016 Jan;49:e10. doi: 10.1017/S003358351600007X. Epub 2016 Jun 24. Q Rev Biophys. 2016. PMID: 27658939 Free PMC article.
-
RNA structure and the regulation of gene expression.Plant Mol Biol. 1996 Oct;32(1-2):89-106. doi: 10.1007/BF00039379. Plant Mol Biol. 1996. PMID: 8980476 Review.
-
Structural principles from large RNAs.Annu Rev Biophys. 2008;37:445-64. doi: 10.1146/annurev.biophys.36.040306.132755. Annu Rev Biophys. 2008. PMID: 18573090 Review.
Cited by
-
Small molecule approaches to targeting RNA.Nat Rev Chem. 2024 Feb;8(2):120-135. doi: 10.1038/s41570-023-00569-9. Epub 2024 Jan 26. Nat Rev Chem. 2024. PMID: 38278932 Review.
-
Atomic model of the Thermus thermophilus 70S ribosome developed in silico.Biophys J. 2004 Oct;87(4):2714-22. doi: 10.1529/biophysj.104.040162. Biophys J. 2004. PMID: 15454463 Free PMC article.
-
The dynamic, motile and deformative properties of RNA nanoparticles facilitate the third milestone of drug development.Adv Drug Deliv Rev. 2022 Jul;186:114316. doi: 10.1016/j.addr.2022.114316. Epub 2022 May 5. Adv Drug Deliv Rev. 2022. PMID: 35526663 Free PMC article. Review.
-
Predicting loop-helix tertiary structural contacts in RNA pseudoknots.RNA. 2010 Mar;16(3):538-52. doi: 10.1261/rna.1800210. Epub 2010 Jan 25. RNA. 2010. PMID: 20100813 Free PMC article.
-
Mining anion-aromatic interactions in the Protein Data Bank.Chem Sci. 2022 Mar 1;13(14):3984-3998. doi: 10.1039/d2sc00763k. eCollection 2022 Apr 6. Chem Sci. 2022. PMID: 35440982 Free PMC article.
LinkOut - more resources
Full Text Sources
Other Literature Sources