Sources of distortion in functional MRI data
- PMID: 10524596
- PMCID: PMC6873315
- DOI: 10.1002/(sici)1097-0193(1999)8:2/3<80::aid-hbm2>3.0.co;2-c
Sources of distortion in functional MRI data
Abstract
Functional magnetic resonance image (fMRI) experiments rely on the ability to detect subtle signal changes in magnetic resonance image time series. Any areas of signal change that correlate with the neurological stimulus can then be identified and compared with a corresponding high-resolution anatomical scan. This report reviews some of the several artefacts that are frequently present in fMRI data, degrading their quality and hence their interpretation. In particular, the effects of magnetic field inhomogeneities are described, both on echo planar imaging (EPI) data and on spiral imaging data. The modulation of these distortions as the subject moves in the magnet is described. The effects of gradient coil nonlinearities and EPI ghost correction schemes are also discussed.
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References
-
- Ahn CB, Kim JH, Cho ZH. 1986. High speed spiral‐scan echo planar NMR imaging—I. IEEE Trans Med Imag MI‐5:2–7. - PubMed
-
- Irarrazabal P, Meyer CH, Nishimura DG, Macovski A. 1996. Inhomogeneity correction using an estimated linear field map. Magn Reson Med 35:278–282. http://www.ncbi.nlm.nih.gov:80/htbin-post/Entrez/query?uid=96208355&form... - PubMed
-
- Jezzard P, Balaban RS. 1995. Correction for geometric distortion in echo planar images from B0 field variations. Magn Reson Med 34:65–73. http://www.ncbi.nlm.nih.gov:80/htbin-post/Entrez/query?uid=95405234&form... - PubMed
-
- Mansfield P. 1977. Multi‐planar image formation using NMR spin echoes. J Phys C 10:L55–L58.
-
- Meyer CH, Macovski A. 1987. Square spiral fast imaging: interleaving and off‐resonance effects. Proc 6th Soc Magn Reson Med 1:230.
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