Tc8, a Tourist-like transposon in Caenorhabditis elegans
- PMID: 11454757
- PMCID: PMC1461737
- DOI: 10.1093/genetics/158.3.1081
Tc8, a Tourist-like transposon in Caenorhabditis elegans
Abstract
Members of the Tourist family of miniature inverted-repeat transposable elements (MITEs) are very abundant among a wide variety of plants, are frequently found associated with normal plant genes, and thus are thought to be important players in the organization and evolution of plant genomes. In Arabidopsis, the recent discovery of a Tourist member harboring a putative transposase has shed new light on the mobility and evolution of MITEs. Here, we analyze a family of Tourist transposons endogenous to the genome of the nematode Caenorhabditis elegans (Bristol N2). One member of this large family is 7568 bp in length, harbors an ORF similar to the putative Tourist transposase from Arabidopsis, and is related to the IS5 family of bacterial insertion sequences (IS). Using database searches, we found expressed sequence tags (ESTs) similar to the putative Tourist transposases in plants, insects, and vertebrates. Taken together, our data suggest that Tourist-like and IS5-like transposons form a superfamily of potentially active elements ubiquitous to prokaryotic and eukaryotic genomes.
Similar articles
-
PIF- and Pong-like transposable elements: distribution, evolution and relationship with Tourist-like miniature inverted-repeat transposable elements.Genetics. 2004 Feb;166(2):971-86. doi: 10.1534/genetics.166.2.971. Genetics. 2004. PMID: 15020481 Free PMC article.
-
Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon.Mol Biol Evol. 2000 May;17(5):730-7. doi: 10.1093/oxfordjournals.molbev.a026351. Mol Biol Evol. 2000. PMID: 10779533
-
Intra- and inter-specific diversity of Tc3-like transposons in nematodes and insects and implications for their evolution and transposition.Gene. 2002 Jan 9;282(1-2):133-42. doi: 10.1016/s0378-1119(01)00841-1. Gene. 2002. PMID: 11814685
-
The hAT family: a versatile transposon group common to plants, fungi, animals, and man.Chromosoma. 2001 Apr;110(1):1-9. doi: 10.1007/s004120000118. Chromosoma. 2001. PMID: 11398971 Review.
-
Transposons in C. elegans.WormBook. 2006 Jan 18:1-13. doi: 10.1895/wormbook.1.70.1. WormBook. 2006. PMID: 18023126 Free PMC article. Review.
Cited by
-
MAK, a computational tool kit for automated MITE analysis.Nucleic Acids Res. 2003 Jul 1;31(13):3659-65. doi: 10.1093/nar/gkg531. Nucleic Acids Res. 2003. PMID: 12824388 Free PMC article.
-
hATpin, a family of MITE-like hAT mobile elements conserved in diverse plant species that forms highly stable secondary structures.Plant Mol Biol. 2005 Aug;58(6):869-886. doi: 10.1007/s11103-005-8271-8. Plant Mol Biol. 2005. PMID: 16240179
-
Continuous exchange of sequence information between dispersed Tc1 transposons in the Caenorhabditis elegans genome.Genetics. 2003 May;164(1):127-34. doi: 10.1093/genetics/164.1.127. Genetics. 2003. PMID: 12750326 Free PMC article.
-
PIF- and Pong-like transposable elements: distribution, evolution and relationship with Tourist-like miniature inverted-repeat transposable elements.Genetics. 2004 Feb;166(2):971-86. doi: 10.1534/genetics.166.2.971. Genetics. 2004. PMID: 15020481 Free PMC article.
-
P instability factor: an active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases.Proc Natl Acad Sci U S A. 2001 Oct 23;98(22):12572-7. doi: 10.1073/pnas.211442198. Epub 2001 Oct 2. Proc Natl Acad Sci U S A. 2001. PMID: 11675493 Free PMC article.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources