doi: 10.1016/0378-4371(92)90500-p.
Fractal landscape analysis of DNA walks
Collaborators,
Affiliations
- PMID: 11537104
- DOI: 10.1016/0378-4371(92)90500-p
Item in Clipboard
Fractal landscape analysis of DNA walks
Physica A.
.
Abstract
By mapping nucleotide sequences onto a "DNA walk", we uncovered remarkably long-range power law correlations [Nature 356 (1992) 168] that imply a new scale invariant property of DNA. We found such long-range correlations in intron-containing genes and in non-transcribed regulatory DNA sequences, but not in cDNA sequences or intron-less genes. In this paper, we present more explicit evidences to support our findings.
Similar articles
-
Fractal landscapes in biological systems: long-range correlations in DNA and interbeat heart intervals.Physica A. 1992 Dec 15;191(1-4):1-12. doi: 10.1016/0378-4371(92)90497-e. Physica A. 1992. PMID: 11537103
-
Statistical and linguistic features of DNA sequences.Fractals. 1995 Jun;3(2):269-84. doi: 10.1142/s0218348x95000229. Fractals. 1995. PMID: 11539281
-
Long-range correlations in nucleotide sequences.Nature. 1992 Mar 12;356(6365):168-70. doi: 10.1038/356168a0. Nature. 1992. PMID: 1301010
-
Fractals in biology and medicine.Chaos Solitons Fractals. 1995;6:171-201. doi: 10.1016/0960-0779(95)80025-c. Chaos Solitons Fractals. 1995. PMID: 11539852 Review.
-
Fractal mechanisms in the electrophysiology of the heart.IEEE Eng Med Biol Mag. 1992 Jun;11(2):47-52. doi: 10.1109/51.139036. IEEE Eng Med Biol Mag. 1992. PMID: 11539106 Review.
Cited by
-
Segmentation of time series in up- and down-trends using the epsilon-tau procedure with application to USD/JPY foreign exchange market data.PLoS One. 2020 Sep 18;15(9):e0239494. doi: 10.1371/journal.pone.0239494. eCollection 2020. PLoS One. 2020. PMID: 32946503 Free PMC article.
-
Phylogenetic distribution of large-scale genome patchiness.BMC Evol Biol. 2008 Apr 11;8:107. doi: 10.1186/1471-2148-8-107. BMC Evol Biol. 2008. PMID: 18405379 Free PMC article.
-
Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA.Comput Math Methods Med. 2015;2015:242695. doi: 10.1155/2015/242695. Epub 2015 Oct 11. Comput Math Methods Med. 2015. PMID: 26539245 Free PMC article.
-
Non-equilibrium dynamics as an indispensable characteristic of a healthy biological system.Integr Physiol Behav Sci. 1994 Jul-Sep;29(3):283-93. doi: 10.1007/BF02691332. Integr Physiol Behav Sci. 1994. PMID: 7811648
-
Diagnosis of skin cancer by correlation and complexity analyses of damaged DNA.Oncotarget. 2015 Dec 15;6(40):42623-31. doi: 10.18632/oncotarget.6003. Oncotarget. 2015. PMID: 26497203 Free PMC article.