Towards genetic genome projects: genomic library screening and gene-targeting vector construction in a single step
- PMID: 11753384
- DOI: 10.1038/ng797
Towards genetic genome projects: genomic library screening and gene-targeting vector construction in a single step
Abstract
We have developed technologies that simplify genomic library construction and screening, substantially reducing both the time and the cost associated with traditional library screening methods and facilitating the generation of gene-targeting constructs. By taking advantage of homologous recombination in Escherichia coli, we were able to use as little as 80 bp of total sequence homology to screen for a specific gene from a genomic library in plasmid or phage form. This method, called recombination cloning (REC), takes only a few days instead of the several weeks required for traditional plaque-lift methods. In addition, because every clone in the mouse genomic library we have constructed has a negative selection marker adjacent to the genomic insert, REC screening can generate gene-targeting vectors in one step, from library screening to finished construct. Conditional targeting constructs can be generated easily with minimal additional manipulation.
Similar articles
-
Vectors for transcription factor cloning and target site identification by means of genetic selection in yeast.Yeast. 1998 Nov;14(15):1407-15. doi: 10.1002/(SICI)1097-0061(199811)14:15<1407::AID-YEA325>3.0.CO;2-M. Yeast. 1998. PMID: 9848232
-
Orpheus recombination : a comprehensive bacteriophage system for murine targeting vector construction by transplacement.Methods Mol Biol. 2008;435:79-94. doi: 10.1007/978-1-59745-232-8_6. Methods Mol Biol. 2008. PMID: 18370069
-
Replicon-free and markerless methods for genomic insertion of DNAs in phage attachment sites and controlled expression of chromosomal genes in Escherichia coli.Biotechnol Bioeng. 2008 Dec 1;101(5):985-95. doi: 10.1002/bit.21976. Biotechnol Bioeng. 2008. PMID: 18553504
-
Recombineering: a powerful new tool for mouse functional genomics.Nat Rev Genet. 2001 Oct;2(10):769-79. doi: 10.1038/35093556. Nat Rev Genet. 2001. PMID: 11584293 Review.
-
Direct cloning of lambda gt11 cDNA inserts into a plasmid vector.Methods Mol Biol. 1994;31:9-17. doi: 10.1385/0-89603-258-2:9. Methods Mol Biol. 1994. PMID: 7921042 Review. No abstract available.
Cited by
-
Defective cardiovascular development and elevated cyclin E and Notch proteins in mice lacking the Fbw7 F-box protein.Proc Natl Acad Sci U S A. 2004 Mar 9;101(10):3338-45. doi: 10.1073/pnas.0307875101. Epub 2004 Feb 6. Proc Natl Acad Sci U S A. 2004. PMID: 14766969 Free PMC article.
-
Fgf16(IRESCre) mice: a tool to inactivate genes expressed in inner ear cristae and spiral prominence epithelium.Dev Dyn. 2009 Feb;238(2):358-66. doi: 10.1002/dvdy.21681. Dev Dyn. 2009. PMID: 18773497 Free PMC article.
-
Ca(2+) permeation and/or binding to CaV1.1 fine-tunes skeletal muscle Ca(2+) signaling to sustain muscle function.Skelet Muscle. 2015 Jan 29;5:4. doi: 10.1186/s13395-014-0027-1. eCollection 2015. Skelet Muscle. 2015. PMID: 25717360 Free PMC article.
-
INPP5E mutations cause primary cilium signaling defects, ciliary instability and ciliopathies in human and mouse.Nat Genet. 2009 Sep;41(9):1027-31. doi: 10.1038/ng.427. Epub 2009 Aug 9. Nat Genet. 2009. PMID: 19668215
-
Simple and straightforward construction of a mouse gene targeting vector using in vitro transposition reactions.Nucleic Acids Res. 2005 Mar 22;33(5):e52. doi: 10.1093/nar/gni055. Nucleic Acids Res. 2005. PMID: 15784610 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources