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. 2002 May;70(5):1363-7.
doi: 10.1086/340318. Epub 2002 Mar 26.

A missense mutation in the LIM2 gene is associated with autosomal recessive presenile cataract in an inbred Iraqi Jewish family

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A missense mutation in the LIM2 gene is associated with autosomal recessive presenile cataract in an inbred Iraqi Jewish family

Eran Pras et al. Am J Hum Genet. 2002 May.

Abstract

In an inbred Iraqi Jewish family, we have studied three siblings with presenile cataract first noticed between the ages of 20 and 51 years and segregating in an autosomal recessive mode. Using microsatellite repeat markers in close proximity to 25 genes and loci previously associated with congenital cataracts in humans and mice, we identified five markers on chromosome 19q that cosegregated with the disease. Sequencing of LIM2, one of two candidate genes in this region, revealed a homozygous T-->G change resulting in a phenylalanine-to-valine substitution at position 105 of the protein. To our knowledge, this constitutes the first report, in humans, of cataract formation associated with a mutation in LIM2. Studies of late-onset single-gene cataracts may provide insight into the pathogenesis of the more common age-related cataracts.

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Figures

Figure  1
Figure 1
Family pedigree and typings for five chromosome 19q markers. Carrier chromosomes are presented in boxes.
Figure  2
Figure 2
Slit lamp photographs of patient II-3. Retroilluminative (a) and tangential (b) views disclose concentric bluish and white cortical opacities, with prominent nuclear sutures.
Figure  3
Figure 3
a, Sequence chromatograms from a normal control subject and a patient. A T→G change in the patient results in valine replacing phenylalanine at codon 105. b, NcoI restriction digest of the mutation. In the carrier chromosome, the 289-bp PCR product is cleaved to yield 261- and 28-bp fragments.
Figure  4
Figure 4
A multiple alignment of a segment of the human LIM2 protein with the corresponding segments in some of its homologues. The sequences were selected using a BLASTP (Altschul et al. 1997; NCBI BLAST home page) search of the human LIM2 against the nonredundant protein database. Multiple alignment of the entire protein length was performed with the ClustalW program, using the default parameters (Higgins et al. 1996). The top sequence is for the mutated human LIM2, and the arrow indicates the F105V mutated position. The GenBank accession numbers of the aligned proteins are listed in the Electronic-Database Information section.

References

Electronic-Database Information

    1. GenBank, http://www.ncbi.nlm.nih.gov/Genbank/GenbankOverview.html (for human LIM2, accession number gi/14754795; rat LIM2, accession number gi/477539; bovine LIM2, accession number gi/482519; and Mus musculus LIM2, accession number gi/12802692).
    1. NCBI BLAST home page, http://www.ncbi.nlm.nih.gov/BLAST/ (for LIM2 homologues)
    1. Online Mendelian Inheritance in Man (OMIM), http://www.ncbi.nlm.nih.gov/Omim/ (for GJA8 [MIM 600897], crystalline gamma complex [MIM 123680], BFSP2 [MIM 603212], CRYGS [MIM 123730], PITX3 [MIM 602669], CRYAB [MIM 123590], LIM1/ AQP0 [MIM 154050], GJA3 [MIM 601885], CRYM [MIM 123740], CRYBA [MIM 600881], GLK1 [MIM 115660], LIM2 [MIM 154045], FTL [MIM 134790], CRYAA [MIM 123580], CRYBB [MIM 601547], BFSP1 [MIM 603307], FOXE3 [MIM 601094] and for known loci with unspecified genes [MIM 116600, 116800, 601202, 605728, 605749, 605387, and 115650])

References

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