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. 2003 Jan 1;31(1):87-9.
doi: 10.1093/nar/gkg024.

RECODE 2003

Pavel V Baranov  1 , Olga L Gurvich, Andrew W Hammer, Raymond F Gesteland, John F Atkins
Affiliations

RECODE 2003

Pavel V Baranov et al. Nucleic Acids Res. .

Abstract

The RECODE database is a compilation of translational recoding events (programmed ribosomal frameshifting, codon redefinition and translational bypass). The database provides information about the genes utilizing these events for their expression, recoding sites, stimulatory sequences and other relevant information. The Database is freely available at http://recode.genetics.utah.edu/.

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References

    1. Baranov P.V., Gurvich,O.L., Fayet,O., Prere,M.F., Miller,W.A., Gesteland,R.F., Atkins,J.F. and Giddings,M.C. (2001) RECODE: a database of frameshifting, bypassing and codon redefinition utilized for gene expression. Nucleic Acids Res., 29, 264–267. - PMC - PubMed
    1. Gesteland R.F. and Atkins,J.F. (1996) Recoding: dynamic reprogramming of translation. Annu. Rev. Biochem., 65, 741–768. - PubMed
    1. Brierley I. and Pennell,S. (2001) Structure and function of the stimulatory RNAs involved in programmed eukaryotic −1 ribosomal frameshifting. Cold Spring Harb. Symp. Quant. Biol., 66, 233–248. - PubMed
    1. Baranov P.V., Gesteland,R.F. and Atkins,J.F. (2002) Recoding: translational bifurcations in gene expression. Gene, 286, 187–201. - PubMed
    1. Stahl G., McCarty,G.P. and Farabaugh,P.J. (2002) Ribosome structure: revisiting the connection between translational accuracy and unconventional decoding. Trends Biochem. Sci., 27, 178–183. - PMC - PubMed

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