The Protein Data Bank and structural genomics
- PMID: 12520059
- PMCID: PMC165515
- DOI: 10.1093/nar/gkg068
The Protein Data Bank and structural genomics
Abstract
The Protein Data Bank (PDB; http://www.pdb.org/) continues to be actively involved in various aspects of the informatics of structural genomics projects--developing and maintaining the Target Registration Database (TargetDB), organizing data dictionaries that will define the specification for the exchange and deposition of data with the structural genomics centers and creating software tools to capture data from standard structure determination applications.
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References
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- Bernstein F.C., Koetzle,T.F., Williams,G.J., Meyer,E.E., Brice,M.D., Rodgers,J.R., Kennard,O., Shimanouchi,T. and Tasumi,M. (1977) Protein Data Bank: a computer-based archival file for macromolecular structures. J. Mol. Biol., 112, 535–542. - PubMed
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- Berman H.M., Bhat,T.N., Bourne,P.E., Feng,Z., Gilliland,G., Weissig,H. and Westbrook,J. (2000) The Protein Data Bank and the challenge of structural genomics. Nature Struct. Biol., 7, 957–959. - PubMed
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- Task Force on Target Tracking (2001) Task Force Reports from the Second International Structural Genomics Meeting. Airlie, VA. http://www.nigms.nih.gov/news/reports/airlie_tasks.html.
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