Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2003 Feb;41(2):813-5.
doi: 10.1128/JCM.41.2.813-815.2003.

Detection of Helicobacter pylori in paraffin-embedded and in shock-frozen gastric biopsy samples by fluorescent in situ hybridization

Affiliations

Detection of Helicobacter pylori in paraffin-embedded and in shock-frozen gastric biopsy samples by fluorescent in situ hybridization

Holger Rüssmann et al. J Clin Microbiol. 2003 Feb.

Abstract

We report on the successful application of fluorescent in situ hybridization for detection of Helicobacter pylori and determination of its clarithromycin susceptibility in formalin-fixed and paraffin-embedded gastric biopsy specimens that had been prepared for pathological examination. This method is useful when results from conventional culturing with antibiotic susceptibility testing are not available.

PubMed Disclaimer

Figures

FIG. 1.
FIG. 1.
Application of FISH for H. pylori detection in formalin-fixed and deparaffinized gastric biopsy specimens and in shock-frozen gastric biopsy specimens from 100 dyspeptic patients. UBT, 13C-urease breath test; RUT, rapid urease test; Cla-S, clarithromycin sensitive; Cla-R, clarithromycin resistant.

References

    1. Bontems, P., J. M. Devaster, L. Corvaglia, A. Dezsofi, C. Van Den Borre, S. Goutier, J. P. Butzler, and S. Cadranel. 2001. Twelve year observation of primary and secondary antibiotic-resistant Helicobacter pylori strains in children. Pediatr. Infect. Dis. J. 20:1033-1038. - PubMed
    1. Malfertheiner, P., F. Megraud, C. O'Morain, A. P. Hungin, R. Jones, A. Axon, D. Y. Graham, and G. Tytgat. 2002. Current concepts in the management of Helicobacter pylori infection. The Maastricht 2-2000 Consensus Report. Aliment. Pharmacol. Ther. 16:167-180. - PubMed
    1. Megraud, F. 2001. Resistance of Helicobacter pylori to antibiotics and its impact on treatment options. Drug Resist. Update 4:178-186. - PubMed
    1. Pina, M., A. Occhialini, L. Monteiro, H. P. Doermann, and F. Megraud. 1998. Detection of point mutations associated with resistance of Helicobacter pylori to clarithromycin by hybridization in liquid phase. J. Clin. Microbiol. 36:3285-3290. - PMC - PubMed
    1. Rüssmann, H., V. A. J. Kempf, S. Koletzko, J. Heesemann, and I. B. Autenrieth. 2001. Comparison of fluorescent in situ hybridization and conventional culturing for detection of Helicobacter pylori in gastric biopsy specimens. J. Clin. Microbiol. 39:304-308. - PMC - PubMed

Publication types

MeSH terms