[Identification of orthopoxvirus species using oligonucleotide micro-chips]
- PMID: 12608052
[Identification of orthopoxvirus species using oligonucleotide micro-chips]
Abstract
A method for describing the Orthopoxviruses that are pathogenic both to man and animals is described in the article. The method is based on hybridization of a fluorescently labelled amplified DNA sample with oligonucleotides, which were immobilized in a microchip. Species-specific regions within the crmB gene encoding a viral analogue of the tumor necrosis factor receptor, i.e. an important gene determining the pathogenicity of the mentioned Orthopoxviruses type, were used as a target for identification. The identification procedure takes around 6 hours and does not demand any costly equipment (a portable fluorescent microscope can be used).
Similar articles
-
Species-level identification of orthopoxviruses with an oligonucleotide microchip.J Clin Microbiol. 2002 Mar;40(3):753-7. doi: 10.1128/JCM.40.3.753-757.2002. J Clin Microbiol. 2002. PMID: 11880388 Free PMC article.
-
Detection and discrimination of orthopoxviruses using microarrays of immobilized oligonucleotides.J Virol Methods. 2003 Sep;112(1-2):67-78. doi: 10.1016/s0166-0934(03)00193-9. J Virol Methods. 2003. PMID: 12951214 Free PMC article.
-
Detection and differentiation of old world orthopoxviruses: restriction fragment length polymorphism of the crmB gene region.J Clin Microbiol. 2001 Jan;39(1):94-100. doi: 10.1128/JCM.39.1.94-100.2001. J Clin Microbiol. 2001. PMID: 11136755 Free PMC article.
-
[Immunomodulatory proteins of orthopoxviruses].Mol Biol (Mosk). 2003 Jan-Feb;37(1):41-53. Mol Biol (Mosk). 2003. PMID: 12624944 Review. Russian.
-
The complete genomic sequence of the modified vaccinia Ankara strain: comparison with other orthopoxviruses.Virology. 1998 May 10;244(2):365-96. doi: 10.1006/viro.1998.9123. Virology. 1998. PMID: 9601507 Review.
Cited by
-
Development of Multiplex RT-PCR with Immobilized Primers for Identification of Infectious Human Pneumonia Pathogens.Mol Biol. 2021;55(6):828-838. doi: 10.1134/S0026893321040063. Epub 2021 Dec 17. Mol Biol. 2021. PMID: 34955557 Free PMC article.
-
40 Years without Smallpox.Acta Naturae. 2017 Oct-Dec;9(4):4-12. Acta Naturae. 2017. PMID: 29340212 Free PMC article.