Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2003;4(3):R23.
doi: 10.1186/gb-2003-4-3-r23. Epub 2003 Feb 27.

The GRID: the General Repository for Interaction Datasets

Bobby-Joe Breitkreutz  1 , Chris Stark, Mike Tyers
Affiliations

The GRID: the General Repository for Interaction Datasets

Bobby-Joe Breitkreutz et al. Genome Biol. 2003.

Abstract

We have developed a relational database, called the General Repository for Interaction Datasets (The GRID) to archive and display physical, genetic and functional interactions. The GRID displays data-rich interaction tables for any protein of interest, combines literature-derived and high-throughput interaction datasets, and is readily accessible via the web. Interactions parsed in The GRID can be viewed in graphical form with a versatile visualization tool called Osprey.

PubMed Disclaimer

Figures

Figure 1
Figure 1
Search result page from The GRID. Multiple experimental systems and sources are indicated.
See this image and copyright information in PMC

Similar articles

  • The GRID: The General Repository for Interaction Datasets.
    Breitkreutz BJ, Stark C, Tyers M. Breitkreutz BJ, et al. Genome Biol. 2002;3(12):PREPRINT0013. Epub 2002 Nov 21. Genome Biol. 2002. PMID: 12537553
  • BioGRID: a general repository for interaction datasets.
    Stark C, Breitkreutz BJ, Reguly T, Boucher L, Breitkreutz A, Tyers M. Stark C, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D535-9. doi: 10.1093/nar/gkj109. Nucleic Acids Res. 2006. PMID: 16381927 Free PMC article.
  • The BioGRID Interaction Database: 2008 update.
    Breitkreutz BJ, Stark C, Reguly T, Boucher L, Breitkreutz A, Livstone M, Oughtred R, Lackner DH, Bähler J, Wood V, Dolinski K, Tyers M. Breitkreutz BJ, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D637-40. doi: 10.1093/nar/gkm1001. Epub 2007 Nov 13. Nucleic Acids Res. 2008. PMID: 18000002 Free PMC article.
  • Osprey: a network visualization system.
    Breitkreutz BJ, Stark C, Tyers M. Breitkreutz BJ, et al. Genome Biol. 2002;3(12):PREPRINT0012. Epub 2002 Nov 21. Genome Biol. 2002. PMID: 12537552
  • Saccharomyces Genome Database provides mutant phenotype data.
    Engel SR, Balakrishnan R, Binkley G, Christie KR, Costanzo MC, Dwight SS, Fisk DG, Hirschman JE, Hitz BC, Hong EL, Krieger CJ, Livstone MS, Miyasato SR, Nash R, Oughtred R, Park J, Skrzypek MS, Weng S, Wong ED, Dolinski K, Botstein D, Cherry JM. Engel SR, et al. Nucleic Acids Res. 2010 Jan;38(Database issue):D433-6. doi: 10.1093/nar/gkp917. Epub 2009 Nov 11. Nucleic Acids Res. 2010. PMID: 19906697 Free PMC article.
See all similar articles

Cited by

See all "Cited by" articles

References

    1. Vidal M. A biological atlas of functional maps. Cell. 2001;104:333–339. - PubMed
    1. The GRID http://biodata.mshri.on.ca/grid
    1. MySQL http://www.mysql.com/
    1. Sun Microsystems Java Standard Development Kit 1.4.0_02 http://java.sun.com
    1. Osprey http://biodata.mshri.on.ca/osprey

Publication types

MeSH terms

Substances

LinkOut - more resources