Reaction of cyanide with cytochrome ba3 from Thermus thermophilus: spectroscopic characterization of the Fe(II)a3-CN.Cu(II)B-CN complex suggests four 14N atoms are coordinated to CuB
- PMID: 1314380
- PMCID: PMC48832
- DOI: 10.1073/pnas.89.8.3195
Reaction of cyanide with cytochrome ba3 from Thermus thermophilus: spectroscopic characterization of the Fe(II)a3-CN.Cu(II)B-CN complex suggests four 14N atoms are coordinated to CuB
Abstract
Cytochrome ba3 from Thermus thermophilus reacts slowly with excess HCN at pH 7.4 to create a form of the enzyme in which CuA, cytochrome b, and CuB remain oxidized, while cytochrome a3 is reduced by one electron, presumably with the formation of cyanogen. We have examined this form of the enzyme by UV-visible, resonance Raman, EPR, and electron nuclear double resonance spectroscopies in conjunction with permutations of 13C- and 15N-labeled cyanide. The results support a model in which one CN- binds through the carbon atom to ferrous a3, supporting a low-spin (S = 0) configuration on the Fe; bridging by this cyanide to the CuB is weak or absent. Four 14N atoms, presumably donated by histidine residues of the protein, provide a strong equatorial ligand field about CuB; a second CN- is coordinated through the carbon atom to CuB in an axial position.
Similar articles
-
The pathway of O₂to the active site in heme-copper oxidases.Biochim Biophys Acta. 2015 Jan;1847(1):109-18. doi: 10.1016/j.bbabio.2014.06.008. Epub 2014 Jul 3. Biochim Biophys Acta. 2015. PMID: 24998308 Free PMC article. Review.
-
Spectroscopic characterization of cytochrome ba3, a terminal oxidase from Thermus thermophilus: comparison of the a3/CuB site to that of bovine cytochrome aa3.Biochemistry. 1994 Mar 15;33(10):3128-41. doi: 10.1021/bi00176a048. Biochemistry. 1994. PMID: 8130228
-
Cyanide binding and active site structure in heme-copper oxidases: normal coordinate analysis of iron-cyanide vibrations of a3(2+)CN- complexes of cytochromes ba3 and aa3.Biospectroscopy. 1998;4(1):1-15. doi: 10.1002/(sici)1520-6343(1998)4:1<1::aid-bspy1>3.0.co;2-a. Biospectroscopy. 1998. PMID: 9547010
-
Fourier transform infrared characterization of a CuB-nitrosyl complex in cytochrome ba3 from Thermus thermophilus: relevance to NO reductase activity in heme-copper terminal oxidases.J Am Chem Soc. 2007 Dec 5;129(48):14952-8. doi: 10.1021/ja074600a. Epub 2007 Nov 13. J Am Chem Soc. 2007. PMID: 17997553 Free PMC article.
-
The mixed valence state of the oxidase binuclear centre: how Thermus thermophilus cytochrome ba3 differs from classical aa3 in the aerobic steady state and when inhibited by cyanide.Biochim Biophys Acta. 2004 Apr 12;1655(1-3):381-7. doi: 10.1016/j.bbabio.2003.06.007. Biochim Biophys Acta. 2004. PMID: 15100054 Review.
Cited by
-
Coordination dynamics of heme-copper oxidases. The ligand shuttle and the control and coupling of electron transfer and proton translocation.J Bioenerg Biomembr. 1993 Apr;25(2):177-88. doi: 10.1007/BF00762859. J Bioenerg Biomembr. 1993. PMID: 8389750 Review.
-
The pathway of O₂to the active site in heme-copper oxidases.Biochim Biophys Acta. 2015 Jan;1847(1):109-18. doi: 10.1016/j.bbabio.2014.06.008. Epub 2014 Jul 3. Biochim Biophys Acta. 2015. PMID: 24998308 Free PMC article. Review.
-
Toward a chemical mechanism of proton pumping by the B-type cytochrome c oxidases: application of density functional theory to cytochrome ba3 of Thermus thermophilus.J Am Chem Soc. 2008 Nov 12;130(45):15002-21. doi: 10.1021/ja803112w. Epub 2008 Oct 17. J Am Chem Soc. 2008. PMID: 18928258 Free PMC article.
-
Probing heart cytochrome c oxidase structure and function by infrared spectroscopy.J Bioenerg Biomembr. 1993 Apr;25(2):81-91. doi: 10.1007/BF00762850. J Bioenerg Biomembr. 1993. PMID: 8389753 Review.
-
Probing the Q-proton pathway of ba3-cytochrome c oxidase by time-resolved Fourier transform infrared spectroscopy.Biophys J. 2004 Apr;86(4):2438-44. doi: 10.1016/S0006-3495(04)74300-3. Biophys J. 2004. PMID: 15041681 Free PMC article.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Medical