Is partial coherence a viable technique for identifying generators of neural oscillations?
- PMID: 15221392
- DOI: 10.1007/s00422-004-0475-5
Is partial coherence a viable technique for identifying generators of neural oscillations?
Abstract
Partial coherence measures the linear relationship between two signals after the influence of a third signal has been removed. Gersch proposed in 1970 that partial coherence could be used to identify sources of driving for multivariate time series. This idea, referred to in this paper as Gersch Causality, has received wide acceptance and has been applied extensively to a variety of fields in the signal processing community. Neurobiological data from a given sensor include both the signals of interest and other unrelated processes collectively referred to as measurement noise. We show that partial-coherence-based Gersch Causality is extremely sensitive to signal-to-noise ratio; that is, for a group of three or more simultaneously recorded time series, the time series with the highest signal-to-noise ratio (i.e., relatively noise free) is often identified as the "driver" of the group, irrespective of the true underlying patterns of connectivity. This hypothesis is tested both theoretically and on experimental time series acquired from limbic brain structures during the theta rhythm.
Comment in
-
Comments on 'Is partial coherence a viable technique for identifying generators of neural oscillations?': Why the term 'Gersch Causality' is inappropriate: common neural structure inference pitfalls.Biol Cybern. 2006 Aug;95(2):135-41. doi: 10.1007/s00422-006-0075-7. Epub 2006 May 20. Biol Cybern. 2006. PMID: 16715246
Similar articles
-
Comments on 'Is partial coherence a viable technique for identifying generators of neural oscillations?': Why the term 'Gersch Causality' is inappropriate: common neural structure inference pitfalls.Biol Cybern. 2006 Aug;95(2):135-41. doi: 10.1007/s00422-006-0075-7. Epub 2006 May 20. Biol Cybern. 2006. PMID: 16715246
-
Stochastic modeling of neurobiological time series: power, coherence, Granger causality, and separation of evoked responses from ongoing activity.Chaos. 2006 Jun;16(2):026113. doi: 10.1063/1.2208455. Chaos. 2006. PMID: 16822045
-
Revealing direction of coupling between neuronal oscillators from time series: phase dynamics modeling versus partial directed coherence.Chaos. 2007 Mar;17(1):013111. doi: 10.1063/1.2430639. Chaos. 2007. PMID: 17411247
-
The theta/gamma discrete phase code occuring during the hippocampal phase precession may be a more general brain coding scheme.Hippocampus. 2005;15(7):913-22. doi: 10.1002/hipo.20121. Hippocampus. 2005. PMID: 16161035 Review.
-
Linear and nonlinear causality between signals: methods, examples and neurophysiological applications.Biol Cybern. 2006 Oct;95(4):349-69. doi: 10.1007/s00422-006-0098-0. Epub 2006 Aug 23. Biol Cybern. 2006. PMID: 16927098 Review.
Cited by
-
Impact of environmental inputs on reverse-engineering approach to network structures.BMC Syst Biol. 2009 Dec 4;3:113. doi: 10.1186/1752-0509-3-113. BMC Syst Biol. 2009. PMID: 19961587 Free PMC article.
-
Traumatic brain injury detection using electrophysiological methods.Front Hum Neurosci. 2015 Feb 4;9:11. doi: 10.3389/fnhum.2015.00011. eCollection 2015. Front Hum Neurosci. 2015. PMID: 25698950 Free PMC article. Review.
-
Measuring connectivity in linear multivariate processes: definitions, interpretation, and practical analysis.Comput Math Methods Med. 2012;2012:140513. doi: 10.1155/2012/140513. Epub 2012 May 14. Comput Math Methods Med. 2012. PMID: 22666300 Free PMC article.
-
Analyzing multiple spike trains with nonparametric Granger causality.J Comput Neurosci. 2009 Aug;27(1):55-64. doi: 10.1007/s10827-008-0126-2. Epub 2009 Jan 10. J Comput Neurosci. 2009. PMID: 19137420
-
Denoising neural data with state-space smoothing: method and application.J Neurosci Methods. 2009 Apr 30;179(1):131-41. doi: 10.1016/j.jneumeth.2009.01.013. Epub 2009 Jan 22. J Neurosci Methods. 2009. PMID: 19428519 Free PMC article.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources