Flash-induced oxygen evolution in photosynthesis: simple solution for the extended S-state model that includes misses, double-hits, inactivation, and backward-transitions
- PMID: 15475587
- PMCID: PMC1305018
- DOI: 10.1529/biophysj.104.050898
Flash-induced oxygen evolution in photosynthesis: simple solution for the extended S-state model that includes misses, double-hits, inactivation, and backward-transitions
Abstract
Flash-induced oxygen evolution in higher plants, algae, and cyanobacteria exhibits damped period-four oscillations. To explain such oscillations, Kok suggested a simple phenomenological S-state model, in which damping is due to empirical misses and double-hits. Here we developed an analytical solution for the extended Kok model that includes misses, double-hits, inactivation, and backward-transitions. The solution of the classic Kok model (with misses and double-hits only) can be obtained as a particular case of this solution. Simple equations describing the flash-number dependence of individual S-states and oxygen evolution in both cases are almost identical and, therefore, the classic Kok model does not have a significant advantage in its simplicity over the extended version considered in this article. Developed equations significantly simplify the fitting of experimental data via standard nonlinear regression analysis and make unnecessary the use of many previously developed methods for finding parameters of the model. The extended Kok model considered here can provide additional insight into the effect of dark relaxation between flashes and inactivation.
Figures




Similar articles
-
Oxygen evolution in photosynthesis: simple analytical solution for the Kok model.Biophys J. 2003 Jul;85(1):435-41. doi: 10.1016/S0006-3495(03)74488-9. Biophys J. 2003. PMID: 12829498 Free PMC article.
-
Thermodynamically accurate modeling of the catalytic cycle of photosynthetic oxygen evolution: a mathematical solution to asymmetric Markov chains.Biochim Biophys Acta. 2013 Jul;1827(7):861-8. doi: 10.1016/j.bbabio.2013.04.008. Epub 2013 Apr 30. Biochim Biophys Acta. 2013. PMID: 23643726
-
Oxygen evolution in photosynthesis: from unicycle to bicycle.Proc Natl Acad Sci U S A. 1993 Mar 1;90(5):1834-8. doi: 10.1073/pnas.90.5.1834. Proc Natl Acad Sci U S A. 1993. PMID: 11607372 Free PMC article.
-
Eight steps preceding O-O bond formation in oxygenic photosynthesis--a basic reaction cycle of the Photosystem II manganese complex.Biochim Biophys Acta. 2007 Jun;1767(6):472-83. doi: 10.1016/j.bbabio.2007.02.022. Epub 2007 Mar 12. Biochim Biophys Acta. 2007. PMID: 17442260 Review.
-
The O2-Evolving Complex of Photosystem II: Recent Insights from Quantum Mechanics/Molecular Mechanics (QM/MM), Extended X-ray Absorption Fine Structure (EXAFS), and Femtosecond X-ray Crystallography Data.Acc Chem Res. 2017 Jan 17;50(1):41-48. doi: 10.1021/acs.accounts.6b00405. Epub 2016 Dec 21. Acc Chem Res. 2017. PMID: 28001034 Review.
Cited by
-
The PsbP-like protein (sll1418) of Synechocystis sp. PCC 6803 stabilises the donor side of Photosystem II.Photosynth Res. 2007 Jul-Sep;93(1-3):101-9. doi: 10.1007/s11120-007-9171-3. Epub 2007 May 22. Photosynth Res. 2007. PMID: 17516145
-
Misses during water oxidation in photosystem II are S state-dependent.J Biol Chem. 2012 Apr 13;287(16):13422-9. doi: 10.1074/jbc.M112.342543. Epub 2012 Feb 28. J Biol Chem. 2012. PMID: 22374999 Free PMC article.
-
Photosynthetic oxygen evolution is not reversed at high oxygen pressures: mechanistic consequences for the water-oxidizing complex.Biochemistry. 2009 Feb 17;48(6):1381-9. doi: 10.1021/bi801774f. Biochemistry. 2009. PMID: 19166323 Free PMC article.
-
Chlorophyll a fluorescence: beyond the limits of the Q(A) model.Photosynth Res. 2014 May;120(1-2):43-58. doi: 10.1007/s11120-013-9806-5. Epub 2013 Mar 1. Photosynth Res. 2014. PMID: 23456268 Review.
-
Frequently asked questions about in vivo chlorophyll fluorescence: practical issues.Photosynth Res. 2014 Nov;122(2):121-58. doi: 10.1007/s11120-014-0024-6. Epub 2014 Aug 15. Photosynth Res. 2014. PMID: 25119687 Free PMC article. Review.
References
-
- Babcock, G. T., and K. Sauer. 1973. Electron paramagnetic resonance signal in spinach chloroplasts. I. Kinetic analysis for untreated chloroplasts. Biochim. Biophys. Acta. 325:483–503. - PubMed
-
- Bader, K. P., P. Thibault, and G. H. Schmid. 1983. A study on oxygen evolution and on the S-state distribution in thylakoid preparations of the filamentous blue-green alga Oscillatoria chatybea. Z. Naturforsch. 38c:778–792.
-
- Beckwith, A. C., and P. A. Jursinic. 1982. An alternative approach to the analysis of photosynthetic oxygen evolution. J. Theor. Biol. 97:251–265.
-
- Blankenship, R. E. 2002. Molecular Mechanisms of Photosynthesis. Blackwell Science, Oxford, UK.
-
- Bouges, B. 1971. Effect of small hydroxylamine concentrations on the oxygen evolution by Chlorella and spinach chloroplasts. Biochim. Biophys. Acta. 234:103–112. - PubMed
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources