Binding properties of the conjugates of oligo(2'-O-methylribonucleotides) with minor groove binders targeted to double stranded DNA
- PMID: 15560096
- DOI: 10.1081/NCN-200026058
Binding properties of the conjugates of oligo(2'-O-methylribonucleotides) with minor groove binders targeted to double stranded DNA
Abstract
Design, synthesis, physico-chemical and in vitro biological studies of new pyrimidine oligo(2'-O-methylribonucleotide) conjugates with oligocarboxamide minor groove binders (MGB) and benzoindoloquinoline intercalator (BIQ) are described. These conjugates formed stable triple helices with the target double-stranded DNA and inhibited its in vitro transcription upon binding.
Similar articles
-
Sequence-specific conjugates of oligo(2'-O-methylribonucleotides) and hairpin oligocarboxamide minor-groove binders: design, synthesis, and binding studies with double-stranded DNA.Chem Biodivers. 2005 Jul;2(7):936-52. doi: 10.1002/cbdv.200590071. Chem Biodivers. 2005. PMID: 17193185
-
Conjugates of oligo(2'-O-methylribonucleotides) with minor groove binders as new sequence-specific agents recognizing both grooves of double-stranded DNA.Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1179-82. doi: 10.1081/NCN-120022830. Nucleosides Nucleotides Nucleic Acids. 2003. PMID: 14565374
-
[Oligo(2'-O-Methylribonucleotides) and their derivatives: IV. Conjugates of oligo(2'-O-methylribonucleotides) with minor groove binders and intercalators: synthesis, properties and application].Bioorg Khim. 2013 Mar-Apr;39(2):159-74. doi: 10.1134/s1068162013010081. Bioorg Khim. 2013. PMID: 23964516 Russian.
-
Sequence-specific recognition of double-stranded DNA by synthetic minor groove binder conjugates. toward the construction of artificial site-specific deoxyribonucleases.Nucleosides Nucleotides Nucleic Acids. 2007;26(10-12):1559-63. doi: 10.1080/15257770701545549. Nucleosides Nucleotides Nucleic Acids. 2007. PMID: 18066826
-
Strategies for the design of minor groove binders: a re-evaluation based on the emergence of site-selective carbohydrate binders.Chem Biol. 1995 Jan;2(1):7-12. doi: 10.1016/1074-5521(95)90075-6. Chem Biol. 1995. PMID: 9383398 Review.
Cited by
-
Synthesis and Evaluation of MGB Polyamide-Oligonucleotide Conjugates as Gene Expression Control Compounds.J Nucleic Acids. 2023 Mar 14;2023:2447998. doi: 10.1155/2023/2447998. eCollection 2023. J Nucleic Acids. 2023. PMID: 36960406 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources