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. 2005 Apr 15;21(8):1735-6.
doi: 10.1093/bioinformatics/bti201. Epub 2004 Dec 7.

CLUSTAG: hierarchical clustering and graph methods for selecting tag SNPs

S I Ao  1 , Kevin Yip, Michael Ng, David Cheung, Pui-Yee Fong, Ian Melhado, Pak C Sham
Affiliations

CLUSTAG: hierarchical clustering and graph methods for selecting tag SNPs

S I Ao et al. Bioinformatics. .

Abstract

Cluster and set-cover algorithms are developed to obtain a set of tag single nucleotide polymorphisms (SNPs) that can represent all the known SNPs in a chromosomal region, subject to the constraint that all SNPs must have a squared correlation R2>C with at least one tag SNP, where C is specified by the user.

Availability: http://hkumath.hku.hk/web/link/CLUSTAG/CLUSTAG.html

Contact: mng@maths.hku.hk.

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