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. 2005 Jan 1;33(Database issue):D647-50.
doi: 10.1093/nar/gki014.

RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome

Tetsuya Sakurai  1 , Masakazu Satou, Kenji Akiyama, Kei Iida, Motoaki Seki, Takashi Kuromori, Takuya Ito, Akihiko Konagaya, Tetsuro Toyoda, Kazuo Shinozaki
Affiliations

RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome

Tetsuya Sakurai et al. Nucleic Acids Res. .

Abstract

The RIKEN Arabidopsis Genome Encyclopedia (RARGE) database houses information on biological resources ranging from transcriptome to phenome, including RIKEN Arabidopsis full-length (RAFL) complementary DNAs (cDNAs), their promoter regions, Dissociation (Ds) transposon-tagged lines and expression data from microarray experiments. RARGE provides tools for searching by resource code, sequence homology or keyword, and rapid access to detailed information on the resources. We have isolated 245 946 RAFL cDNA clones and collected 11 933 transposon-tagged lines, which are available from the RIKEN Bioresource Center and are stored in RARGE. The RARGE web interface can be accessed at http://rarge.gsc.riken.jp/. Additionally, we report 90 000 new RAFL cDNA clones here.

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Figures

Figure 1
Figure 1
Genome map shows Arabidopsis chromosome 1 around RAFL09-82-P03 and indicates Ds-tagged mutants (gray downward-pointing arrowheads), RAFL cDNAs (red arrow bar), chromosome (green broad bar) and predicted genes from MIPS (khaki arrow bar).
See this image and copyright information in PMC

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