Conformations of co-translational folding intermediates
- PMID: 15723645
- DOI: 10.2174/0929866053005908
Conformations of co-translational folding intermediates
Abstract
While in vitro experiments have contributed much to our understanding of protein folding, we know much less about how proteins fold in the more complex environment of the cell. This review summarizes our current knowledge of the earliest in vivo folding intermediates: the conformations adopted by nascent polypeptides during synthesis by the ribosome. The challenges related to successful folding in the cellular environment, including off-pathway aggregation and macromolecular crowding, are also discussed.
Similar articles
-
Modeling protein folding in vivo.Biol Direct. 2018 Jul 6;13(1):13. doi: 10.1186/s13062-018-0217-6. Biol Direct. 2018. PMID: 29980221 Free PMC article.
-
Nascent chains can form co-translational folding intermediates that promote post-translational folding outcomes in a disease-causing protein.Nat Commun. 2021 Nov 8;12(1):6447. doi: 10.1038/s41467-021-26531-1. Nat Commun. 2021. PMID: 34750347 Free PMC article.
-
The ribosome as a platform for co-translational processing, folding and targeting of newly synthesized proteins.Nat Struct Mol Biol. 2009 Jun;16(6):589-97. doi: 10.1038/nsmb.1614. Nat Struct Mol Biol. 2009. PMID: 19491936 Review.
-
Molecular chaperones in the cytosol: from nascent chain to folded protein.Science. 2002 Mar 8;295(5561):1852-8. doi: 10.1126/science.1068408. Science. 2002. PMID: 11884745 Review.
-
Different conformations of nascent peptides on ribosomes.J Mol Biol. 1998 May 15;278(4):713-23. doi: 10.1006/jmbi.1998.1721. J Mol Biol. 1998. PMID: 9614937
Cited by
-
Autotransporters: The Cellular Environment Reshapes a Folding Mechanism to Promote Protein Transport.J Phys Chem Lett. 2012 Apr 2;3(8):1063-1071. doi: 10.1021/jz201654k. J Phys Chem Lett. 2012. PMID: 23687560 Free PMC article.
-
Molecular simulations of cotranslational protein folding: fragment stabilities, folding cooperativity, and trapping in the ribosome.PLoS Comput Biol. 2006 Jul 28;2(7):e98. doi: 10.1371/journal.pcbi.0020098.eor. Epub 2006 Jun 14. PLoS Comput Biol. 2006. PMID: 16789821 Free PMC article.
-
Directionality in protein fold prediction.BMC Bioinformatics. 2010 Apr 7;11:172. doi: 10.1186/1471-2105-11-172. BMC Bioinformatics. 2010. PMID: 20374616 Free PMC article.
-
A method for direct measurement of protein stability in vivo.Methods Mol Biol. 2009;490:165-78. doi: 10.1007/978-1-59745-367-7_7. Methods Mol Biol. 2009. PMID: 19157083 Free PMC article.
-
Probing ribosome-nascent chain complexes produced in vivo by NMR spectroscopy.Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22239-44. doi: 10.1073/pnas.0903750106. Epub 2009 Dec 17. Proc Natl Acad Sci U S A. 2009. PMID: 20018739 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources