doi: 10.1093/bioinformatics/bti331.
Epub 2005 Mar 1.
Protein structure topological comparison, discovery and matching service
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- PMID: 15741246
- DOI: 10.1093/bioinformatics/bti331
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Protein structure topological comparison, discovery and matching service
Bioinformatics.
.
Abstract
We describe a fold level fast protein comparison and motif matching facility based on the TOPS representation of structure. This provides an update to a previous service at the EBI, with a better graph matching with faster results and visualization of both the structures being compared against and the common pattern of each with the target domain.
Availability: Web service at http://balabio.dcs.gla.ac.uk/tops or via the main TOPS site at http://www.tops.leeds.ac.uk. Software is also available for download from these sites.
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