Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4
- PMID: 15801843
- DOI: 10.1021/jm049092j
Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4
Abstract
The "receiver operating characteristic" (ROC) curve method is a well-recognized metric used as an objective way to evaluate the ability of a given test to discriminate between two populations. This facilitates decision-making in a plethora of fields in which a wrong judgment may have serious consequences including clinical diagnosis, public safety, travel security, and economic strategies. When virtual screening is used to speed-up the drug discovery process in pharmaceutical research, taking the right decision upon selecting or discarding a molecule prior to in vitro evaluation is of paramount importance. Characterizing both the ability of a virtual screening workflow to select active molecules and the ability to discard inactive ones, the ROC curve approach is well suited for this critical decision gate. As a case study, the first virtual screening workflow focused on metabotropic glutamate receptor subtype 4 (mGlu4R) agonists is reported here. Six compounds out of 38 selected and tested in vitro were shown to have agonist activity on this target of therapeutic interest.
Similar articles
-
A virtual screening hit reveals new possibilities for developing group III metabotropic glutamate receptor agonists.J Med Chem. 2010 Apr 8;53(7):2797-813. doi: 10.1021/jm901523t. J Med Chem. 2010. PMID: 20218620
-
Iterative experimental and virtual high-throughput screening identifies metabotropic glutamate receptor subtype 4 positive allosteric modulators.J Mol Model. 2012 Sep;18(9):4437-46. doi: 10.1007/s00894-012-1441-0. Epub 2012 May 17. J Mol Model. 2012. PMID: 22592386 Free PMC article.
-
A novel selective metabotropic glutamate receptor 4 agonist reveals new possibilities for developing subtype selective ligands with therapeutic potential.FASEB J. 2012 Apr;26(4):1682-93. doi: 10.1096/fj.11-195941. Epub 2012 Jan 5. FASEB J. 2012. PMID: 22223752
-
Recent advances in the drug discovery of metabotropic glutamate receptor 4 (mGluR4) activators for the treatment of CNS and non-CNS disorders.Expert Opin Drug Discov. 2012 Mar;7(3):261-80. doi: 10.1517/17460441.2012.660914. Epub 2012 Feb 14. Expert Opin Drug Discov. 2012. PMID: 22468956 Review.
-
Structures of mGluRs shed light on the challenges of drug development of allosteric modulators.Curr Opin Pharmacol. 2015 Feb;20:1-7. doi: 10.1016/j.coph.2014.09.022. Epub 2014 Oct 17. Curr Opin Pharmacol. 2015. PMID: 25462286 Review.
Cited by
-
Bioinformatics: A rational combine approach used for the identification and in-vitro activity evaluation of potent β-Glucuronidase inhibitors.PLoS One. 2018 Dec 5;13(12):e0200502. doi: 10.1371/journal.pone.0200502. eCollection 2018. PLoS One. 2018. PMID: 30517092 Free PMC article.
-
In silico design and in vitro assessment of anti-Helicobacter pylori compounds as potential small-molecule arginase inhibitors.Mol Divers. 2022 Dec;26(6):3365-3378. doi: 10.1007/s11030-021-10371-8. Epub 2022 Jan 8. Mol Divers. 2022. PMID: 34997872
-
Turbo prediction: a new approach for bioactivity prediction.J Comput Aided Mol Des. 2022 Jan;36(1):77-85. doi: 10.1007/s10822-021-00440-3. Epub 2022 Jan 21. J Comput Aided Mol Des. 2022. PMID: 35059941
-
Identification of new natural DNA G-quadruplex binders selected by a structure-based virtual screening approach.Molecules. 2013 Sep 30;18(10):12051-70. doi: 10.3390/molecules181012051. Molecules. 2013. PMID: 24084014 Free PMC article.
-
In Silico Screening of Isocitrate Lyase for Novel Anti-Buruli Ulcer Natural Products Originating from Africa.Molecules. 2018 Jun 27;23(7):1550. doi: 10.3390/molecules23071550. Molecules. 2018. PMID: 29954088 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Chemical Information
Research Materials