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Review
. 2005 Apr;137(4):1174-81.
doi: 10.1104/pp.104.057034.

Sequencing the genespaces of Medicago truncatula and Lotus japonicus

Nevin D Young  1 , Steven B Cannon, Shusei Sato, Dongjin Kim, Douglas R Cook, Chris D Town, Bruce A Roe, Satoshi Tabata
Affiliations
Review

Sequencing the genespaces of Medicago truncatula and Lotus japonicus

Nevin D Young et al. Plant Physiol. 2005 Apr.
No abstract available

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Figures

Figure 1.
Figure 1.
Sequence-based synteny between Mt and Lj. Provisional assemblies for all eight of Mt's chromosomes are displayed along side regions of sequence homology in Lj. Mt chromosome assemblies were constructed from sequenced phase 2 and 3 BACs, with order inferred from a combination of genetic map anchors, finger print contigs, and overlapping BAC sequence data. For each BAC along the assembly, the top reciprocal BLAST hits to predicted Mt genes are shown as colored bars for each of the six Lj chromosomes. Broader bars indicate regions of predicted synteny, corresponding to four or more genes with conserved order and orientation in both genomes. The heights of broader bars also indicate the length along Mt chromosome assemblies where synteny is observed.
See this image and copyright information in PMC

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References

    1. Ane JM, Kiss GB, Riely BK, Penmetsa RV, Oldroyd GE, Ayax C, Levy J, Debelle F, Baek JM, Kalo P, et al (2004) Medicago truncatula DMI1 required for bacterial and fungal symbioses in legumes. Science 303: 1364–1367 - PubMed
    1. Apweiler R, Bairoch A, Wu CH, Barker WC, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R, Magrane M, et al (2004) UniProt: the universal protein knowledgebase. Nucleic Acids Res 32: D115–D119 - PMC - PubMed
    1. Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796–815 - PubMed
    1. Asamizu E, Kato T, Sato S, Nakamura Y, Kaneko T, Tabata S (2003. a) Structural analysis of a Lotus japonicus genome. IV. Sequence features and mapping of seventy-three TAC clones which cover the 7.5 Mb regions of the genome. DNA Res 10: 115–122 - PubMed
    1. Asamizu E, Nakamura Y, Sato S, Tabata S (2003. b) Characteristics of the Lotus japonicus gene repertoire deduced from large-scale expressed sequence tag (EST) analysis. Plant Mol Biol 54: 405–414 - PubMed

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