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. 2005 Jul 1;21(13):3051-2.
doi: 10.1093/bioinformatics/bti451. Epub 2005 Apr 19.

S-SPatt: simple statistics for patterns on Markov chains

Grégory Nuel  1
Affiliations

S-SPatt: simple statistics for patterns on Markov chains

Grégory Nuel. Bioinformatics. .

Abstract

S-SPatt allows the counting of patterns occurrences in text files and, assuming these texts are generated from a random Markovian source, the computation of the P-value of a given observation using a simple binomial approximation.

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