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. 2005 Jul 15;21(14):3179-80.
doi: 10.1093/bioinformatics/bti450. Epub 2005 Apr 19.

HCPM--program for hierarchical clustering of protein models

Dominik Gront  1 , Andrzej Kolinski
Affiliations

HCPM--program for hierarchical clustering of protein models

Dominik Gront et al. Bioinformatics. .

Abstract

HCPM is a tool for clustering protein structures from comparative modeling, ab initio structure prediction, etc. A hierarchical clustering algorithm is designed and tested, and a heuristic is provided for an optimal cluster selection. The method has been successfully tested during the CASP6 experiment.

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