Morphological aspects of oligomeric protein structures
- PMID: 15895504
- DOI: 10.1016/j.pbiomolbio.2004.07.010
Morphological aspects of oligomeric protein structures
Abstract
Features of multimeric proteins are reviewed to shed light on the formation of protein assemblies from a structural perspective. The features comprise biochemical and geometric properties. They are compiled on new low-redundancy sets of crystal structures of homomeric proteins with different symmetry and subunit multiplicity, as well as on a set of heteromeric proteins. Crystal structures of likely monomers provide a control group.
Similar articles
-
3D complex: a structural classification of protein complexes.PLoS Comput Biol. 2006 Nov 17;2(11):e155. doi: 10.1371/journal.pcbi.0020155. Epub 2006 Oct 5. PLoS Comput Biol. 2006. PMID: 17112313 Free PMC article.
-
Widening the protein crystallization bottleneck.Nat Methods. 2006 Dec;3(12):961. doi: 10.1038/nmeth1206-961. Nat Methods. 2006. PMID: 17190005
-
Protein complexes: structure prediction challenges for the 21st century.Curr Opin Struct Biol. 2005 Feb;15(1):15-22. doi: 10.1016/j.sbi.2005.01.012. Curr Opin Struct Biol. 2005. PMID: 15718128 Review.
-
Membrane protein crystallization in amphiphile phases: practical and theoretical considerations.Prog Biophys Mol Biol. 2005 Jul;88(3):339-57. doi: 10.1016/j.pbiomolbio.2004.07.006. Epub 2004 Oct 7. Prog Biophys Mol Biol. 2005. PMID: 15652249 Free PMC article. Review.
-
Graph theoretic properties of networks formed by the Delaunay tessellation of protein structures.Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Apr;73(4 Pt 1):041925. doi: 10.1103/PhysRevE.73.041925. Epub 2006 Apr 25. Phys Rev E Stat Nonlin Soft Matter Phys. 2006. PMID: 16711854
Cited by
-
Agrobacterium tumefaciens VirB8 structure reveals potential protein-protein interaction sites.Proc Natl Acad Sci U S A. 2006 Feb 21;103(8):2582-7. doi: 10.1073/pnas.0511216103. Epub 2006 Feb 15. Proc Natl Acad Sci U S A. 2006. PMID: 16481621 Free PMC article.
-
Comprehensive, atomic-level characterization of structurally characterized protein-protein interactions: the PICCOLO database.BMC Bioinformatics. 2011 Jul 29;12:313. doi: 10.1186/1471-2105-12-313. BMC Bioinformatics. 2011. PMID: 21801404 Free PMC article.
-
The Trypanosoma cruzi virulence factor oligopeptidase B (OPBTc) assembles into an active and stable dimer.PLoS One. 2012;7(1):e30431. doi: 10.1371/journal.pone.0030431. Epub 2012 Jan 19. PLoS One. 2012. PMID: 22276197 Free PMC article.
-
3D complex: a structural classification of protein complexes.PLoS Comput Biol. 2006 Nov 17;2(11):e155. doi: 10.1371/journal.pcbi.0020155. Epub 2006 Oct 5. PLoS Comput Biol. 2006. PMID: 17112313 Free PMC article.
-
2-Step purification of the Ku DNA repair protein expressed in Escherichia coli.Protein Expr Purif. 2007 Mar;52(1):139-45. doi: 10.1016/j.pep.2006.10.002. Epub 2006 Oct 10. Protein Expr Purif. 2007. PMID: 17110127 Free PMC article.