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. 2005 Aug 1;21(15):3322-3.
doi: 10.1093/bioinformatics/bti513. Epub 2005 May 24.

Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm

Zoltán Gáspári  1 , Kristian Vlahovicek, Sándor Pongor
Affiliations

Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm

Zoltán Gáspári et al. Bioinformatics. .

Abstract

An improved version of the PRIDE (PRobaility of IDEntity) fold prediction algorithm has been developed, based on more solid statistical basis, fast search capabilities and efficient input structure processing. The new algorithm is effective in identifying protein structures at the 'H' level of the CATH hierarchy.

Availability: The new algorithm is integrated into the PRIDE2 web servers at http://pride.szbk.u-szeged.hu and http://www.icgeb.org/pride.

Supplementary information: Detailed documentation and performance evaluation is available in the description section of the PRIDE2 web server.

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