Evaluation of seaFAST, a rapid fluorescent in situ hybridization test, for detection of Helicobacter pylori and resistance to clarithromycin in paraffin-embedded biopsy sections
- PMID: 16000488
- PMCID: PMC1169084
- DOI: 10.1128/JCM.43.7.3494-3496.2005
Evaluation of seaFAST, a rapid fluorescent in situ hybridization test, for detection of Helicobacter pylori and resistance to clarithromycin in paraffin-embedded biopsy sections
Abstract
A commercially available rapid fluorescent in situ hybridization (FISH) test, (seaFAST H. pylori Combi-Kit; SeaPro Theranostics International, Lelystad, The Netherlands) was used to simultaneously detect the presence of Helicobacter pylori and determine clarithromycin susceptibility in paraffin-embedded biopsy sections. The FISH method was found to be 97% sensitive, 94% specific for the detection of H. pylori and comparable to agar dilution for the detection of resistance to clarithromycin.
References
-
- Best, L. M., D. J. M. Haldane, M. Keelan, D. E. Taylor, A. B. R. Thomson, V. Loo, C. A. Fallone, P. Lyn, F. M. Smaill, R. Hunt, C. Gaudreau, J. Kennedy, M. Alfa, R. Pelletier, and S. J. O. Veldhuyzen van Zanten. 2003. Multilaboratory comparison of proficiencies in susceptibility testing of Helicobacter pylori and correlation between agar dilution and E test methods. Antimicrob. Agents Chemother. 47:3138-3144. - PMC - PubMed
-
- Dailidiene, D., M. T. Bertoli, J. Miciuleviciene, A. K. Mukhopadhyay, G. Dailide, M. A. Pascasio, L. Kupcinskas, and D. E. Berg. 2002. Emergence of tetracycline resistance in Helicobacter pylori: multiple mutational changes in 16S ribosomal DNA and other genetic loci. Antimicrob. Agents Chemother. 46:3940-3946. - PMC - PubMed
-
- Graham, D. Y. 1998. Antibiotic resistance in Helicobacter pylori: implications for therapy. Gastroenterology 115:1272-1277. - PubMed
-
- Jüttner, S., M. Vieth, S. Miehlke, W. Schneider-Brachert, C. Kirsch, T. Pfeuffer, N. Lehn, and M. Stolte. 2004. Reliable detection of macrolide-resistant Helicobacter pylori via fluorescence in situ hybridization in formalin-fixed tissue. Mod. Pathol. 17:684-689. - PubMed
-
- Kim, J. J., J. G. Kim, and D. H. Kwon. 2003. Mixed-infection of antibiotic susceptible and resistant Helicobacter pylori isolates in a single patient and underestimation of antimicrobial susceptibility testing. Helicobacter 8:202-206. - PubMed
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Medical