RNA meets chromatin
- PMID: 16024654
- DOI: 10.1101/gad.1324305
RNA meets chromatin
Abstract
In the universe of science, two worlds have recently collided-those of RNA and chromatin. The intersection of these two fields has been impending, but evidence for such a meaningful collision has only recently become apparent. In this review, we discuss the implications for noncoding RNAs and the formation of specialized chromatin domains in various epigenetic processes as diverse as dosage compensation, RNA interference-mediated heterochromatin assembly and gene silencing, and programmed DNA elimination. While mechanistic details as to how the RNA and chromatin worlds connect remain unclear, intriguing parallels exist in the overall design and machinery used in model organisms from all eukaryotic kingdoms. The role of potential RNA-binding chromatin-associated proteins will be discussed as one possible link between RNA and chromatin.
Similar articles
-
Molecular biology. RNAi and heterochromatin--a hushed-up affair.Science. 2002 Sep 13;297(5588):1818-9. doi: 10.1126/science.1075874. Epub 2002 Aug 22. Science. 2002. PMID: 12193643 No abstract available.
-
Heterochromatin and epigenetic control of gene expression.Science. 2003 Aug 8;301(5634):798-802. doi: 10.1126/science.1086887. Science. 2003. PMID: 12907790 Review.
-
Caught in conspiracy: cooperation between DNA methylation and histone H3K9 methylation in the establishment and maintenance of heterochromatin.Biochem Cell Biol. 2005 Jun;83(3):385-95. doi: 10.1139/o05-043. Biochem Cell Biol. 2005. PMID: 15959564 Review.
-
Epigenetic aspects of X-chromosome dosage compensation.Science. 2001 Aug 10;293(5532):1083-5. doi: 10.1126/science.1063073. Science. 2001. PMID: 11498577
-
DNA-RNA hybrid formation mediates RNAi-directed heterochromatin formation.Genes Cells. 2012 Mar;17(3):218-33. doi: 10.1111/j.1365-2443.2012.01583.x. Epub 2012 Jan 27. Genes Cells. 2012. PMID: 22280061
Cited by
-
Uncovering RNA Editing Sites in Long Non-Coding RNAs.Front Bioeng Biotechnol. 2014 Dec 5;2:64. doi: 10.3389/fbioe.2014.00064. eCollection 2014. Front Bioeng Biotechnol. 2014. PMID: 25538940 Free PMC article.
-
Evidence of spatially bound gene regulation in Mus musculus: decreased gene expression proximal to microRNA genomic location.Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):5020-5. doi: 10.1073/pnas.0611078104. Epub 2007 Mar 12. Proc Natl Acad Sci U S A. 2007. PMID: 17360362 Free PMC article.
-
AURKB-mediated effects on chromatin regulate binding versus release of XIST RNA to the inactive chromosome.J Cell Biol. 2009 Aug 24;186(4):491-507. doi: 10.1083/jcb.200811143. J Cell Biol. 2009. PMID: 19704020 Free PMC article.
-
Chromatin modifying agents in the in vitro production of bovine embryos.Vet Med Int. 2010 Sep 29;2011:694817. doi: 10.4061/2011/694817. Vet Med Int. 2010. PMID: 20936105 Free PMC article.
-
Chromatin-mediated epigenetic regulation in the malaria parasite Plasmodium falciparum.Eukaryot Cell. 2010 Aug;9(8):1138-49. doi: 10.1128/EC.00036-10. Epub 2010 May 7. Eukaryot Cell. 2010. PMID: 20453074 Free PMC article. Review.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources