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. 2005 Sep 15;21(18):3691-3.
doi: 10.1093/bioinformatics/bti589. Epub 2005 Jul 19.

PACdb: PolyA Cleavage Site and 3'-UTR Database

J Michael Brockman  1 , Priyam Singh, Donglin Liu, Sean Quinlan, Jesse Salisbury, Joel H Graber
Affiliations

PACdb: PolyA Cleavage Site and 3'-UTR Database

J Michael Brockman et al. Bioinformatics. .

Abstract

The PolyA Cleavage Site and 3'-UTR Database (PACdb) is a web-accessible database that catalogs putative 3'-processing sites and 3'-UTR sequences for multiple organisms. Sites have been identified primarily via expressed sequence tag-genome alignments, enabling delineation of both the specificities and heterogeneity of 3'-processing events.

Availability: By web browser or CGI: PACdb: http://harlequin.jax.org/pacdb/; AtPACdb: http://harlequin.jax.org/atpacdb/.

Supplementary information: Available online at http://harlequin.jax.org/pacdb/supplemental.php.

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