Engineering drought and salinity tolerance in plants: lessons from genome-wide expression profiling in Arabidopsis
- PMID: 16165235
- DOI: 10.1016/j.tibtech.2005.09.001
Engineering drought and salinity tolerance in plants: lessons from genome-wide expression profiling in Arabidopsis
Abstract
World food security is increasingly dependent on continuous crop improvement and, in particular, the development of crops with increased drought and salinity tolerance. The completed genomic sequence of the model plant Arabidopsis thaliana and the development of whole-genome microarrays, together with increasing repositories of publicly available data and data analysis tools, have opened new avenues to genome-wide systemic analysis of plant stress responses. Here we outline examples of how this full-genome expression profiling can contribute to our understanding of complex stress responses and the identification and evaluation of novel transgenes that could hold the key to the development of commercially viable and sustainable crop plants.
Similar articles
-
Expression profiling and mutant analysis reveals complex regulatory networks involved in Arabidopsis response to Botrytis infection.Plant J. 2006 Oct;48(1):28-44. doi: 10.1111/j.1365-313X.2006.02849.x. Epub 2006 Aug 22. Plant J. 2006. PMID: 16925600
-
The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses.Plant J. 2007 Apr;50(2):347-63. doi: 10.1111/j.1365-313X.2007.03052.x. Epub 2007 Mar 21. Plant J. 2007. PMID: 17376166
-
XVSAP1 from Xerophyta viscosa improves osmotic-, salinity- and high-temperature-stress tolerance in Arabidopsis.Biotechnol J. 2006 Oct;1(10):1137-46. doi: 10.1002/biot.200600136. Biotechnol J. 2006. PMID: 17004302
-
Role of plant RNA-binding proteins in development, stress response and genome organization.Trends Plant Sci. 2009 Apr;14(4):229-36. doi: 10.1016/j.tplants.2009.01.007. Epub 2009 Mar 13. Trends Plant Sci. 2009. PMID: 19285908 Review.
-
Arabidopsis paves the way: genomic and network analyses in crops.Curr Opin Biotechnol. 2011 Apr;22(2):260-70. doi: 10.1016/j.copbio.2010.11.010. Epub 2010 Dec 15. Curr Opin Biotechnol. 2011. PMID: 21167706 Review.
Cited by
-
Transcriptome analysis of smooth cordgrass (Spartina alterniflora Loisel), a monocot halophyte, reveals candidate genes involved in its adaptation to salinity.BMC Genomics. 2016 Aug 19;17(1):657. doi: 10.1186/s12864-016-3017-3. BMC Genomics. 2016. PMID: 27542721 Free PMC article.
-
Molecular genetic improvement of cereals: transgenic wheat (Triticum aestivum L.).Plant Cell Rep. 2007 Aug;26(8):1133-54. doi: 10.1007/s00299-007-0338-3. Epub 2007 Apr 13. Plant Cell Rep. 2007. PMID: 17431631 Review.
-
The association among gene expression responses to nine abiotic stress treatments in Arabidopsis thaliana.Genetics. 2006 Dec;174(4):1811-24. doi: 10.1534/genetics.106.061374. Epub 2006 Oct 8. Genetics. 2006. PMID: 17028338 Free PMC article.
-
Crosstalk between diurnal rhythm and water stress reveals an altered primary carbon flux into soluble sugars in drought-treated rice leaves.Sci Rep. 2017 Aug 15;7(1):8214. doi: 10.1038/s41598-017-08473-1. Sci Rep. 2017. PMID: 28811563 Free PMC article.
-
Transcriptomics-proteomics analysis reveals StCOMT1 regulates drought, alkali and combined stresses in potato.Plant Cell Rep. 2025 Apr 29;44(5):109. doi: 10.1007/s00299-025-03496-9. Plant Cell Rep. 2025. PMID: 40299051
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources