Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2005:61 Suppl 7:24-26.
doi: 10.1002/prot.20719.

System for accepting server predictions in CASP6

Affiliations

System for accepting server predictions in CASP6

Volker A Eyrich et al. Proteins. 2005.

Abstract

We describe the new CASP system for collecting and verifying predictions generated by servers. The system was developed to ensure reliable execution of the server assessment part of CASP, with particular emphasis on data consistency. Following the principle that predictions should not be modified by anyone but their authors and to allow a later meaningful assessment, submissions are now verified for correctness of format and contents within the strict 48 hour CASP deadlines for this type of submission. This article also provides an overview of the rules governing server participation in CASP6 and some statistics pertaining to servers in CASP6.

PubMed Disclaimer

Similar articles

Cited by

References

REFERENCES

    1. Zemla A, Venclovas C, Reinhardt A, Fidelis K, Hubbard T. Numerical criteria for the evaluation of ab initio predictions of protein structure. Proteins 1997; Suppl 1: 140-150.
    1. Fischer D, Barret C, Bryson K, Elofsson A, Godzik A, Jones D, Karplus KJ, Kelley LA, MacCallum RM, Pawowski K, Rost B, Rychlewski L, Sternberg M. CAFASP-1: critical assessment of fully automated structure prediction methods. Proteins 1999; Suppl 3: 209-217.
    1. Eyrich VA, Rost B. META-PP: single interface to crucial prediction servers. Nucleic Acids Res 2003; 31: 3308-3310.
    1. Koh IY, Eyrich VA, Marti-Renom MA, Przybylski D, Madhusudhan MS, Eswar N, Grana O, Pazos F, Valencia A, Sali A, Rost B. EVA: evaluation of protein structure prediction servers. Nucleic Acids Res 2003; 31: 3311-3315.
    1. Available online at http://www2.predictioncenter.org/Serv/menu_frames.html

Publication types

LinkOut - more resources