Evaluation of the new GenoType Mycobacterium assay for identification of mycobacterial species
- PMID: 16455880
- PMCID: PMC1392669
- DOI: 10.1128/JCM.44.2.334-339.2006
Evaluation of the new GenoType Mycobacterium assay for identification of mycobacterial species
Abstract
The new commercial assay GenoType Mycobacterium, intended for the identification of mycobacteria, was evaluated with a panel of 197 strains belonging to 86 different taxa. The system, which relies on solid-phase reverse hybridization, is composed of two different kits: GenoType CM for the identification of more frequently detected mycobacterial species and GenoType AS for less common species. The sensitivity and specificity were 97.9% and 92.4% for the CM kit and 99.3% and 99.4% for the AS kit. Our results show that the system may represent a useful tool to substantially enlarge the number of mycobacteria that can be reliably identified in clinical laboratories.
Figures
Similar articles
-
Rapid identification of Mycobacteria to the species level using INNO-LiPA Mycobacteria, a reverse hybridization assay.J Clin Microbiol. 2001 Dec;39(12):4477-82. doi: 10.1128/JCM.39.12.4477-4482.2001. J Clin Microbiol. 2001. PMID: 11724865 Free PMC article.
-
[Comparison of two reverse hybridization methods for mycobacterial identification in clinical practice].Pathol Biol (Paris). 2004 Oct;52(8):462-8. doi: 10.1016/j.patbio.2004.07.018. Pathol Biol (Paris). 2004. PMID: 15465265 French.
-
Evaluation of the Speed-oligo® Mycobacteria assay for identification of Mycobacterium spp. from fresh liquid and solid cultures of human clinical samples.Diagn Microbiol Infect Dis. 2010 Oct;68(2):123-31. doi: 10.1016/j.diagmicrobio.2010.06.006. Diagn Microbiol Infect Dis. 2010. PMID: 20846584
-
[Molecular identification of mycobacteria and detection of antibiotic resistance].Ann Biol Clin (Paris). 2004 Jul-Aug;62(4):405-13. Ann Biol Clin (Paris). 2004. PMID: 15297234 Review. French.
-
Methods for the rapid identification of mycobacterial species.Clin Lab Med. 1996 Sep;16(3):603-15. Clin Lab Med. 1996. PMID: 8866182 Review.
Cited by
-
Evaluation of GenoType NTM-DR Assay for Identification of Mycobacterium chimaera.J Clin Microbiol. 2017 Jun;55(6):1821-1826. doi: 10.1128/JCM.00009-17. Epub 2017 Mar 29. J Clin Microbiol. 2017. PMID: 28356415 Free PMC article.
-
Mycobacterium marinum.Microbiol Spectr. 2017 Apr;5(2):10.1128/microbiolspec.tnmi7-0038-2016. doi: 10.1128/microbiolspec.TNMI7-0038-2016. Microbiol Spectr. 2017. PMID: 28387180 Free PMC article. Review.
-
Molecular Mycobacteriology and Expansion in Disease Diagnosis.Indian J Clin Biochem. 2016 Apr;31(2):138-47. doi: 10.1007/s12291-015-0504-2. Epub 2015 Apr 28. Indian J Clin Biochem. 2016. PMID: 27069321 Free PMC article. Review.
-
Diagnosis of active tuberculosis disease: From microscopy to molecular techniques.J Clin Tuberc Other Mycobact Dis. 2016 May 25;4:33-43. doi: 10.1016/j.jctube.2016.05.005. eCollection 2016 Aug. J Clin Tuberc Other Mycobact Dis. 2016. PMID: 31723686 Free PMC article. Review.
-
Mycobacterium marinum: A Case-Based Narrative Review of Diagnosis and Management.Microorganisms. 2023 Jul 13;11(7):1799. doi: 10.3390/microorganisms11071799. Microorganisms. 2023. PMID: 37512971 Free PMC article. Review.
References
-
- Alcaide, F., I. Richter, C. Bernasconi, B. Springer, C. Hagenau, R. Schulze-Röbbecke, E. Tortoli, R. Martín, E. Böttger, and A. Telenti. 1997. Heterogeneity and clonality among isolates of Mycobacterium kansasii: implications for epidemiological and pathogenicity studies. J. Clin. Microbiol. 35:1959-1964. - PMC - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Research Materials