Band-selective 13C homonuclear 3D spectroscopy for solid proteins at high field with rotor-synchronized soft pulses
- PMID: 16645815
- DOI: 10.1007/s10858-006-0026-6
Band-selective 13C homonuclear 3D spectroscopy for solid proteins at high field with rotor-synchronized soft pulses
Abstract
We demonstrate improved 3D 13C-13C-13C chemical shift correlation experiments for solid proteins, utilizing band-selective coherence transfer, scalar decoupling and homonuclear zero-quantum polarization transfer. Judicious use of selective pulses and a z-filter period suppress artifacts with a two-step phase cycle, allowing higher digital resolution in a fixed measurement time. The novel correlation of C(ali)-C(ali)-CX (C(ali) for aliphatic carbons, CX for any carbon) reduces measurement time by an order of magnitude without sacrificing digital resolution. The experiment retains intensity from side-chain carbon resonances whose chemical shift dispersion is critical to minimize spectral degeneracy for large proteins with a predominance of secondary structure, such as beta-sheet rich fibrillar proteins and alpha-helical membrane proteins. We demonstrate the experiment for the beta1 immunoglobulin binding domain of protein G (GB1) and fibrils of the A30P mutant of alpha-synuclein, which is implicated in Parkinson's disease. Selective pulses of duration comparable the rotor period give optimal performance, but must be synchronized with the spinning in non-trivial ways to minimize chemical shift anisotropy recoupling effects. Soft pulses with a small bandwidth-duration product are best for exciting the approximately 70 ppm bandwidth required for aliphatic-only dimensions.
Similar articles
-
Dipolar chemical shift correlation spectroscopy for homonuclear carbon distance measurements in proteins in the solid state: application to structure determination and refinement.J Am Chem Soc. 2008 Jan 9;130(1):359-69. doi: 10.1021/ja076658v. Epub 2007 Dec 12. J Am Chem Soc. 2008. PMID: 18072776
-
Homonuclear decoupled 13C chemical shift anisotropy in 13C doubly labeled peptides by selective-pulse solid-state NMR.J Magn Reson. 2003 Feb;160(2):114-9. doi: 10.1016/s1090-7807(02)00140-4. J Magn Reson. 2003. PMID: 12615151
-
Band-selective recoupling of homonuclear double-quantum dipolar interaction with a generalized composite 0 degrees pulse: application to 13C aliphatic region-selective magnetization transfer in solids.J Magn Reson. 2003 May;162(1):54-66. doi: 10.1016/s1090-7807(02)00191-x. J Magn Reson. 2003. PMID: 12762983
-
Homonuclear dipolar recoupling techniques for structure determination in uniformly 13C-labeled proteins.Solid State Nucl Magn Reson. 2009 Nov;36(3):119-28. doi: 10.1016/j.ssnmr.2009.07.003. Epub 2009 Aug 5. Solid State Nucl Magn Reson. 2009. PMID: 19729285 Review.
-
Homonuclear decoupling for enhancing resolution and sensitivity in NOE and RDC measurements of peptides and proteins.J Magn Reson. 2014 Apr;241:97-102. doi: 10.1016/j.jmr.2013.11.006. Epub 2013 Nov 22. J Magn Reson. 2014. PMID: 24360766 Free PMC article. Review.
Cited by
-
3D (13)C-(13)C-(13)C correlation NMR for de novo distance determination of solid proteins and application to a human alpha-defensin.J Magn Reson. 2010 Feb;202(2):203-10. doi: 10.1016/j.jmr.2009.11.011. Epub 2009 Nov 18. J Magn Reson. 2010. PMID: 19963419 Free PMC article.
-
Position-Specific Substitution in Cellulose Ethers Studied by DNP Enhanced Solid-State NMR Spectroscopy.Magn Reson Chem. 2025 Jul;63(8):560-568. doi: 10.1002/mrc.5535. Epub 2025 May 22. Magn Reson Chem. 2025. PMID: 40404341 Free PMC article.
-
Magic-angle spinning solid-state NMR of a 144 kDa membrane protein complex: E. coli cytochrome bo3 oxidase.J Biomol NMR. 2006 Sep;36(1):55-71. doi: 10.1007/s10858-006-9070-5. Epub 2006 Sep 9. J Biomol NMR. 2006. PMID: 16964530
-
Resolution enhancement by homonuclear J-decoupling: application to three-dimensional solid-state magic angle spinning NMR spectroscopy.J Biomol NMR. 2008 May;41(1):9-15. doi: 10.1007/s10858-008-9233-7. Epub 2008 Apr 11. J Biomol NMR. 2008. PMID: 18404253
-
J-Based 3D sidechain correlation in solid-state proteins.Phys Chem Chem Phys. 2009 Aug 28;11(32):7078-86. doi: 10.1039/b911570f. Epub 2009 Jul 20. Phys Chem Chem Phys. 2009. PMID: 19652843 Free PMC article.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources