[Polymorphisms of myocilin and optineurin in primary open angle glaucoma patients]
- PMID: 16681888
[Polymorphisms of myocilin and optineurin in primary open angle glaucoma patients]
Abstract
Objective: To detect the single nucleotide polymorphisms (SNPs) of the myocilin (MYOC) and optineurin (OPTN) genes, and to investigate their associations with high tension glaucoma (HTG) and normal tension glaucoma (NTG).
Methods: SNPs were detected using polymerase chain reaction (PCR), followed by conformation sensitive gel electrophoresis (CSGE) and fluorescent labeling automated DNA sequencing among 94 unrelated patients with HTG, 48 unrelated patients with NTG, and 77 unrelated control subjects.
Results: Fourteen MYOC sequence alterations were identified, five of them: V53A, I304I, T347T, 1-126T > C, and IVS2 + 172C > A, were novel. Among them, V53A was for the first time found in primary open angle glaucoma (POAG) patient. R76K usually occurred with the promoter polymorphism 1-83G > A. No sequence alterations in the MYOC gene showed significant differences among the HTG, NTG and control subjects (all P > 0.05). A total of 12 sequence alterations were identified in the OPTN gene, and three of them: V161M, I407T and L211L, were novel. Among them, I407T and L211L were found only in the HTG patients. The allele and genotype frequencies of T34T in the NTG patients were significantly higher than those of the controls (P = 0.001 and 0.004 respectively). In HTG, only the allele frequency of T34T was 24% (23/96), significantly higher than those of the NTG group (16.5%, 31/188) and the control group (9.1%, 14/154) (both P < 0.05). In addition, IVS8 + 20G > A was found only in the HTG (3.1%, 3/96) and NTG patients (3.7%, 7/188), and had significantly higher frequencies in the HTG and NTG patients when compared with the controls (P = 0.016 and 0.014, and P = 0.027 and 0.026).
Conclusion: Polymorphisms in the MYOC and OPTN genes are associated with POAG in Chinese people. Moreover, sequence alterations not causing amino acid changes may play a role in the pathogenesis of POAG.
Similar articles
-
SNPs and interaction analyses of myocilin, optineurin, and apolipoprotein E in primary open angle glaucoma patients.Mol Vis. 2005 Aug 29;11:625-31. Mol Vis. 2005. PMID: 16148883
-
[Single nucleotide polymorphisms of the myocilin gene in primary open-angle glaucoma patients].Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2004 Feb;21(1):70-3. Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2004. PMID: 14767915 Chinese.
-
Mutations in MYOC gene of Indian primary open angle glaucoma patients.Mol Vis. 2002 Nov 15;8:442-8. Mol Vis. 2002. PMID: 12447164
-
Genetic dissection of myocilin glaucoma.Hum Mol Genet. 2004 Apr 1;13 Spec No 1:R91-102. doi: 10.1093/hmg/ddh074. Epub 2004 Feb 5. Hum Mol Genet. 2004. PMID: 14764620 Review.
-
[Current status of genome research on open-angle glaucoma in Finland].Duodecim. 2011;127(14):1426-31. Duodecim. 2011. PMID: 21888043 Review. Finnish.
Cited by
-
The Role of Mitophagy in Glaucomatous Neurodegeneration.Cells. 2023 Jul 30;12(15):1969. doi: 10.3390/cells12151969. Cells. 2023. PMID: 37566048 Free PMC article. Review.
-
Coding Region Mutation Screening in Optineurin in Chinese Normal-Tension Glaucoma Patients.Dis Markers. 2019 May 6;2019:5820537. doi: 10.1155/2019/5820537. eCollection 2019. Dis Markers. 2019. PMID: 31198474 Free PMC article.
-
Different WDR36 mutation pattern in Chinese patients with primary open-angle glaucoma.Mol Vis. 2009;15:646-53. Epub 2009 Apr 3. Mol Vis. 2009. PMID: 19347049 Free PMC article.
-
Loss of optineurin in vivo results in elevated cell death and alters axonal trafficking dynamics.PLoS One. 2014 Oct 16;9(10):e109922. doi: 10.1371/journal.pone.0109922. eCollection 2014. PLoS One. 2014. PMID: 25329564 Free PMC article.
-
Myocilin polymorphisms and primary open-angle glaucoma: a systematic review and meta-analysis.PLoS One. 2012;7(9):e46632. doi: 10.1371/journal.pone.0046632. Epub 2012 Sep 28. PLoS One. 2012. PMID: 23029558 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources