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. 2006 Jun 20;103(25):9398-403.
doi: 10.1073/pnas.0508370103. Epub 2006 Jun 12.

Helices

Affiliations

Helices

Nadia Chouaieb et al. Proc Natl Acad Sci U S A. .

Abstract

Helices are among the simplest shapes that are observed in the filamentary and molecular structures of nature. The local mechanical properties of such structures are often modeled by a uniform elastic potential energy dependent on bending and twist, which is what we term a rod model. Our first result is to complete the semi-inverse classification, initiated by Kirchhoff, of all infinite, helical equilibria of inextensible, unshearable uniform rods with elastic energies that are a general quadratic function of the flexures and twist. Specifically, we demonstrate that all uniform helical equilibria can be found by means of an explicit planar construction in terms of the intersections of certain circles and hyperbolas. Second, we demonstrate that the same helical centerlines persist as equilibria in the presence of realistic distributed forces modeling nonlocal interactions as those that arise, for example, for charged linear molecules and for filaments of finite thickness exhibiting self-contact. Third, in the absence of any external loading, we demonstrate how to construct explicitly two helical equilibria, precisely one of each handedness, that are the only local energy minimizers subject to a nonconvex constraint of self-avoidance.

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Conflict of interest statement

Conflict of interest statement: No conflicts declared.

Figures

Fig. 1.
Fig. 1.
The hyperboloid in curvature space (u1, u2, u3) on which all helical solutions for a quadratic energy W are located (case shown: K1 = 1, K2 = 3/2, K23 = K13 = 1/2, û1 = 1, û2 = û3 = 0). We show various helical solutions for different points on the hyperboloid. (Inset) A planar horizontal section of the hyperboloid (case shown: u3 = 3/2).
Fig. 2.
Fig. 2.
With body forces created by pairwise central nonlocal interactions, the contributions to the total body force on the cross section at s by points located at s± δ is along the principal normal ν(s).
Fig. 3.
Fig. 3.
The geometry of helical tubes with circular cross sections. (A) In the curvature–torsion plane, helices are in contact at the boundary between the clear and opaque region. (B) The helix H0 corresponds to a helical tube with self-penetration while H1 and H2 are in self-contact. The configuration H0 is the stress-free configuration for the elastic energy W1 = u12 + (u2 − 9/10)2 + 3/4(u3 − 2/10)2 when self-avoidance is not taken into account. Helical configurations H1 and H2 are two minimum energy configurations of opposite-handedness respecting self-avoidance. For reasons of geometric clarity, the point H0 has been chosen comparatively close to the boundary κ = 1 where for some materials the validity of a rod model might already be considered questionable, but the same geometric phenomena persist for choices of H0 arbitrarily close to the origin.
Fig. 4.
Fig. 4.
The contact surface in u-space is obtained by rotating the curve in Fig. 3A around the vertical axis. Given an unstressed configuration in the forbidden region (due to self-penetration) represented by a point H0, there exist two helices with self-contact and no external loading obtained by finding the tangency points of the contact surface with a level set of the energy W1 = C in the upper (right-handed) and lower (left-handed), half space. The two tangency points correspond to the solutions H1,2 of Fig. 3.

References

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