Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2007 Jan;35(Database issue):D301-3.
doi: 10.1093/nar/gkl971. Epub 2006 Nov 16.

The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

Affiliations

The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

Helen Berman et al. Nucleic Acids Res. 2007 Jan.

Abstract

The worldwide Protein Data Bank (wwPDB) is the international collaboration that manages the deposition, processing and distribution of the PDB archive. The online PDB archive is a repository for the coordinates and related information for more than 38 000 structures, including proteins, nucleic acids and large macromolecular complexes that have been determined using X-ray crystallography, NMR and electron microscopy techniques. The founding members of the wwPDB are RCSB PDB (USA), MSD-EBI (Europe) and PDBj (Japan) [H.M. Berman, K. Henrick and H. Nakamura (2003) Nature Struct. Biol., 10, 980]. The BMRB group (USA) joined the wwPDB in 2006. The mission of the wwPDB is to maintain a single archive of macromolecular structural data that are freely and publicly available to the global community. Additionally, the wwPDB provides a variety of services to a broad community of users. The wwPDB website at http://www.wwpdb.org/ provides information about services provided by the individual member organizations and about projects undertaken by the wwPDB.

PubMed Disclaimer

References

    1. Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., Shindyalov I.N., Bourne P.E. The Protein Data Bank. Nucleic Acids Res. 2000;28:235–242. - PMC - PubMed
    1. Berman H.M., Henrick K., Nakamura H. Announcing the worldwide Protein Data Bank. Nature Struct. Biol. 2003;10:980. - PubMed
    1. Bernstein F.C., Koetzle T.F., Williams G.J.B., Meyer E.F., Brice M.D., Rodgers J.R., Kennard O., Shimanouchi T., Tasumi M. Protein Data Bank: a computer-based archival file for macromolecular structures. J. Mol. Biol. 1977;112:535–542. - PubMed
    1. Henrick K., Berman H.M., Nakamura H. The Protein Data Bank and the wwPDB. In: Jorde L.B., Little P.F.R., Dunn M.J., Subramaniam S., editors. Encyclopedia of Genomics, Proteomics, and Bioinformatics. Vol. 7. John Wiley & Sons Ltd, Chichester; 2005. pp. 3335–3339.
    1. Golovin A., Oldfield T.J., Tate J.G., Velankar S., Barton G.J., Boutselakis H., Dimitropoulos D., Fillon J., Hussain A., Ionides J.M., et al. E-MSD: an integrated data resource for bioinformatics. Nucleic Acids Res. 2004;32:D211–D216. - PMC - PubMed

Publication types

Substances