Gene expression profiling for the diagnosis of acute leukaemia
- PMID: 17146476
- PMCID: PMC2360048
- DOI: 10.1038/sj.bjc.6603495
Gene expression profiling for the diagnosis of acute leukaemia
Abstract
An optimised diagnostic setting in acute leukaemias combines cytomorphology and cytochemistry, multiparameter immunophenotyping, cytogenetics, fluorescence in situ hybridisation, and polymerase chain reaction (PCR)-based assays. This allows classification and definition of biologically defined and prognostically relevant subtypes, and allows directed treatment in some sub-entities. Over the last years the microarray technology has helped to quantify simultaneously the expression status of ten thousands of genes in single experiments. This novel approach will hopefully become an essential tool for the molecular classification of acute leukaemias in the near future. It can be anticipated that new biologically defined and clinically relevant subtypes of leukaemia will be identified based on their unique gene expression profiles. This method may therefore guide therapeutic decisions and should be investigated in a diagnostic setting in parallel to established standard methods.
Similar articles
-
Role of gene expression profiling for diagnosing acute leukemias.Rev Clin Exp Hematol. 2005 Jun 1;9(1):E1. Rev Clin Exp Hematol. 2005. PMID: 16027103 Review.
-
[Microarrays and gene expression profiling for the diagnosis in leukemia. From research studies to routine application].Med Klin (Munich). 2006 Nov 15;101(11):908-14. doi: 10.1007/s00063-006-1124-7. Med Klin (Munich). 2006. PMID: 17235479 Review. German.
-
Gene expression profiling as a tool for the diagnosis of acute leukemias.Semin Hematol. 2003 Oct;40(4):281-95. doi: 10.1016/s0037-1963(03)00193-8. Semin Hematol. 2003. PMID: 14582079 Review.
-
Gene expression profiling as a diagnostic tool in acute myeloid leukemia.Am J Pharmacogenomics. 2004;4(4):225-37. doi: 10.2165/00129785-200404040-00002. Am J Pharmacogenomics. 2004. PMID: 15287816 Review.
-
[Molecular classification in leukemias using gene expression profiling].Med Klin (Munich). 2004 Aug 15;99(8):464-6. doi: 10.1007/s00063-004-1069-7. Med Klin (Munich). 2004. PMID: 15309276 German.
Cited by
-
ER Stress and Unfolded Protein Response in Leukemia: Friend, Foe, or Both?Biomolecules. 2021 Jan 30;11(2):199. doi: 10.3390/biom11020199. Biomolecules. 2021. PMID: 33573353 Free PMC article. Review.
-
MicroRNA expression signatures accurately discriminate acute lymphoblastic leukemia from acute myeloid leukemia.Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19971-6. doi: 10.1073/pnas.0709313104. Epub 2007 Dec 4. Proc Natl Acad Sci U S A. 2007. PMID: 18056805 Free PMC article.
-
Decision of the Optimal Rank of a Nonnegative Matrix Factorization Model for Gene Expression Data Sets Utilizing the Unit Invariant Knee Method: Development and Evaluation of the Elbow Method for Rank Selection.JMIR Bioinform Biotechnol. 2023 Jun 6;4:e43665. doi: 10.2196/43665. JMIR Bioinform Biotechnol. 2023. PMID: 38935969 Free PMC article.
References
-
- Alcalay M, Tiacci E, Bergomas R, Bigerna B, Venturini E, Minardi SP, Meani N, Diverio D, Bernard L, Tizzoni L, Volorio S, Luzi L, Colombo E, Lo Coco F, Mecucci C, Falini B, Pelicci PG (2005) Acute myeloid leukemia bearing cytoplasmic nucleophosmin (NPMc+AML) shows a distinct gene expression profile characterized by up-regulation of genes involved in stem-cell maintenance. Blood 106: 899–902 - PubMed
-
- Armstrong SA, Staunton JE, Silverman LB, Pieters R, den Boer ML, Minden MD, Sallan SE, Lander ES, Golub TR, Korsmeyer SJ (2002) MLL translocations specify a distinct gene expression profile that distinguishes a unique leukemia. Nat Genet 30: 41–47 - PubMed
-
- Bullinger L, Valk PJ (2005) Gene expression profiling in acute myeloid leukemia. J Clin Oncol 23: 6296–6305 - PubMed
-
- Chiaretti S, Li X, Gentleman R, Vitale A, Wang KS, Mandelli F, Foa R, Ritz J (2005) Gene expression profiles of B-lineage adult acute lymphocytic leukemia reveal genetic patterns that identify lineage derivation and distinct mechanisms of transformation. Clin Cancer Res 11: 7209–7219 - PubMed
-
- Debernardi S, Lillington DM, Chaplin T, Tomlinson S, Amess J, Rohatiner A, Lister TA, Young BD (2003) Genome-wide analysis of acute myeloid leukemia with normal karyotype reveals a unique pattern of homeobox gene expression distinct from those with translocation-mediated fusion events. Genes Chromosomes Cancer 37: 149–158 - PubMed
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources
Medical