Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2007 Jun 1;92(11):4002-11.
doi: 10.1529/biophysj.107.104026. Epub 2007 Mar 9.

Lipid chain-length dependence for incorporation of alamethicin in membranes: electron paramagnetic resonance studies on TOAC-spin labeled analogs

Affiliations

Lipid chain-length dependence for incorporation of alamethicin in membranes: electron paramagnetic resonance studies on TOAC-spin labeled analogs

Derek Marsh et al. Biophys J. .

Abstract

Alamethicin is a 19-residue hydrophobic peptide, which is extended by a C-terminal phenylalaninol but lacks residues that might anchor the ends of the peptide at the lipid-water interface. Voltage-dependent ion channels formed by alamethicin depend strongly in their characteristics on chain length of the host lipid membranes. EPR spectroscopy is used to investigate the dependence on lipid chain length of the incorporation of spin-labeled alamethicin in phosphatidylcholine bilayer membranes. The spin-label amino acid TOAC is substituted at residue positions n = 1, 8, or 16 in the sequence of alamethicin F50/5 [TOAC(n), Glu(OMe)(7,18,19)]. Polarity-dependent isotropic hyperfine couplings of the three TOAC derivatives indicate that alamethicin assumes approximately the same location, relative to the membrane midplane, in fluid diC(N)PtdCho bilayers with chain lengths ranging from N = 10-18. Residue TOAC(8) is situated closest to the bilayer midplane, whereas TOAC(16) is located farther from the midplane in the hydrophobic core of the opposing lipid leaflet, and TOAC(1) remains in the lipid polar headgroup region. Orientational order parameters indicate that the tilt of alamethicin relative to the membrane normal is relatively small, even at high temperatures in the fluid phase, and increases rather slowly with decreasing chain length (from 13 degrees to 23 degrees for N = 18 and 10, respectively, at 75 degrees C). This is insufficient for alamethicin to achieve hydrophobic matching. Alamethicin differs in its mode of incorporation from other helical peptides for which transmembrane orientation has been determined as a function of lipid chain length.

PubMed Disclaimer

Figures

FIGURE 1
FIGURE 1
Orientation of TOAC-labeled alamethicin in a lipid membrane. The principal molecular diffusion axis, R, is inclined at instantaneous angle γ to the membrane normal N. The nitroxide z axis is oriented at constant angle θz to R. The experimental order parameter, Szz, of the nitroxide z axis is given by Eq. 5 where, for axial symmetry, 〈P2(cosγ)〉 is the order parameter of the alamethicin diffusion axis.
FIGURE 2
FIGURE 2
Conventional EPR spectra (V1-display) of [Glu(OMe)7,18,19] alamethicin analogs with TOAC substituted for: residue 1, TOAC1; residue 8, TOAC8; or residue 16, TOAC16 in phosphatidylcholine bilayers of chain lengths C10–C18, as indicated, at 75°C. Total scan width = 100 G.
FIGURE 3
FIGURE 3
Temperature dependences of the outer hyperfine splittings, 2Amax, for [Glu(OMe)7,18,19] alamethicin TOAC1 (squares), TOAC8 (circles), and TOAC16 (triangles) analogs in phosphatidylcholine bilayers of chain lengths C10–C18, as indicated.
FIGURE 4
FIGURE 4
Temperature dependences of the effective isotropic hyperfine couplings, formula image for [Glu(OMe)7,18,19] alamethicin TOAC1 (squares), TOAC8 (circles), and TOAC16 (triangles) analogs in phosphatidylcholine bilayers of chain lengths C10–C18, as indicated.
FIGURE 5
FIGURE 5
Left-hand panel: chain-length dependence (N) of the effective isotropic hyperfine couplings, ao, for [Glu(OMe)7,18,19] alamethicin TOAC1 (squares), TOAC8 (circles), and TOAC16 (triangles) analogs in fluid diCNPtdCho bilayers. Right-hand panel: positional dependence (n) of the isotropic hyperfine couplings for nitroxides at position C-n in the sn-2 chain of n-PCSL phosphatidylcholine spin probes in diC14PtdCho (circles) or diC16PtdCho (squares) fluid bilayers (20). Values of ao are given relative to those in methanol: Δao = ao(PtdCho) − ao(MeOH). Horizontal dotted lines are the values of Δao in MeOH and in EtOH, as indicated.
FIGURE 6
FIGURE 6
Chain-length dependences (N) of the effective order parameters, Szz, for [Glu(OMe)7,18,19] alamethicin TOAC1 (squares), TOAC8 (circles), and TOAC16 (triangles) analogs in diCNPtdCho bilayers at 75°C (solid symbols) and 80°C (open symbols).
FIGURE 7
FIGURE 7
Solid lines: chain-length dependence (N) of the order parameters, 〈P2(cosγ)〉, for the alamethicin diffusion axis in diCNPtdCho bilayers at 75°C (solid squares) and 80°C (solid circles). Dotted lines: orientation, P2(cosθz), of the nitroxide z axis for TOAC1 (open squares), TOAC8 (open circles), and TOAC16 (open triangles) in [Glu(OMe)7,18,19] alamethicin analogs. Values are determined from nonlinear least squares fitting of Eq. 5 to the chain-length dependence of Szz measured at 75°C and 80°C, with constant θz for each TOAC position (see text and Fig. 1).
FIGURE 8
FIGURE 8
Saturation transfer EPR spectra (V2′-display) of [Glu(OMe)7,18,19] alamethicin analogs with TOAC substituted for: residue 1, TOAC1; residue 8, TOAC8; and residue 16, TOAC16 in phosphatidylcholine bilayers of chain lengths C10–C18 at the temperatures indicated. Total scan width = 160 G.
FIGURE 9
FIGURE 9
Temperature dependences of the integrated intensity, IST, from the ST-EPR spectra of the TOAC8 [Glu(OMe)7,18,19] alamethicin analog in diCNPtdCho bilayers with N = 12 (squares), 14 (circles), 16 (triangles), and 18 (diamonds). Data points for N = 10 superimpose on those for N = 12.
FIGURE 10
FIGURE 10
Chain-length dependences of the thickness of diCNPtdCho bilayers for N = 12, 14 (34), and 16 (35) at 50°C. Solid squares: thickness of the hydrocarbon core, dC; open squares: anhydrous bilayer thickness, db; open circles: steric thickness of the bilayer, dst = dC + 1.8 nm. Measurements of dC and db for N = 12 and 14 at 30°C are corrected to 50°C by using an expansion coefficient αd = (1/d)(∂d/∂T) = −0.0032K−1 (34). Sloping lines are linear regressions. The approximate position of [Glu(OMe)7,18,19] alamethicin in diC14PtdCho and diC16PtdCho bilayers, consistent with Fig. 5, is indicated by the heavy vertical line and horizontal dotted lines (Cα-atoms), which are located at ∼ +1.45, +0.4, and −0.8 nm for TOAC1, TOAC8, and TOAC16, respectively.
FIGURE 11
FIGURE 11
Predicted dependence of the order parameter of the long axis of alamethicin on chain length of host diCNPtdCho bilayers according to Eq. 6 (solid lines) or Eq. 7 (dashed lines) and Eq. 8 for hydrophobic matching. Dimensions of the lipid hydrocarbon core, dC, are taken from Fig. 10, and the hydrophobic span of alamethicin is dp = 2.8 nm or 3.4 nm, as indicated. Squares (circles) are order parameter measurements at 75°C (85°C); dotted lines are nonlinear fits of Eqs. 7 and 8 with formula image and ΔdC/dp = 0.0147 ± 0.0006 (0.0159 ± 0.0005).

Similar articles

Cited by

References

    1. Fox, R. O. Jr., and F. M. Richards. 1982. A voltage-gated ion channel model inferred from the crystal structure of alamethicin at 1.5 Å resolution. Nature. 300:325–330. - PubMed
    1. Nagaraj, R., and P. Balaram. 1981. Alamethicin, a transmembrane channel. Acc. Chem. Res. 14:356–362.
    1. Hall, J. E., I. Vodyanoy, T. M. Balasubramanian, and G. R. Marshall. 1984. Alamethicin—a rich model for channel behavior. Biophys. J. 45:233–247. - PMC - PubMed
    1. Barranger-Mathys, M., and D. S. Cafiso. 1996. Membrane structure of voltage-gated channel forming peptides by site-directed spin-labeling. Biochemistry. 35:498–505. - PubMed
    1. Marsh, D., M. Jost, C. Peggion, and C. Toniolo. 2007. TOAC spin labels in the backbone of alamethicin: EPR studies in lipid membranes. Biophys. J. 92:473–481. - PMC - PubMed

MeSH terms

LinkOut - more resources