Crop evolution: from genetics to genomics
- PMID: 17933510
- DOI: 10.1016/j.gde.2007.09.003
Crop evolution: from genetics to genomics
Abstract
The advent of the genomics age has greatly facilitated the study of crop evolution. While full-scale genome sequencing projects are underway for just a handful of crop plants, recent years have witnessed a tremendous increase in the availability of DNA sequence data for virtually all major crops. Such resources have bolstered 'traditional' genetic approaches such as QTL mapping and candidate gene-based association studies. They have also allowed us to undertake genome-wide analyses in which we simultaneously consider the importance of a large and essentially random collection of genes. These sorts of analyses promise a more or less unbiased view of the genetic basis of crop evolution and will probably result in the identification of agronomically important genes that would have otherwise been overlooked.
Similar articles
-
Advances in cereal genomics and applications in crop breeding.Trends Biotechnol. 2006 Nov;24(11):490-9. doi: 10.1016/j.tibtech.2006.08.006. Epub 2006 Sep 7. Trends Biotechnol. 2006. PMID: 16956681 Review.
-
Population genetics of genomics-based crop improvement methods.Trends Genet. 2011 Mar;27(3):98-106. doi: 10.1016/j.tig.2010.12.003. Epub 2011 Jan 10. Trends Genet. 2011. PMID: 21227531 Review.
-
Emerging trends in the functional genomics of the abiotic stress response in crop plants.Plant Biotechnol J. 2007 May;5(3):361-80. doi: 10.1111/j.1467-7652.2007.00239.x. Plant Biotechnol J. 2007. PMID: 17430544 Review.
-
Genomics-based approaches to improve drought tolerance of crops.Trends Plant Sci. 2006 Aug;11(8):405-12. doi: 10.1016/j.tplants.2006.06.003. Epub 2006 Jul 13. Trends Plant Sci. 2006. PMID: 16843036 Review.
-
Allele mining in crops: prospects and potentials.Biotechnol Adv. 2010 Jul-Aug;28(4):451-61. doi: 10.1016/j.biotechadv.2010.02.007. Epub 2010 Feb 25. Biotechnol Adv. 2010. PMID: 20188810 Review.
Cited by
-
The genetics of domestication of rice bean, Vigna umbellata.Ann Bot. 2010 Dec;106(6):927-44. doi: 10.1093/aob/mcq188. Epub 2010 Sep 29. Ann Bot. 2010. PMID: 20880934 Free PMC article.
-
Levels and patterns of nucleotide variation in domestication QTL regions on rice chromosome 3 suggest lineage-specific selection.PLoS One. 2011;6(6):e20670. doi: 10.1371/journal.pone.0020670. Epub 2011 Jun 6. PLoS One. 2011. PMID: 21674010 Free PMC article.
-
Development and evaluation of single-nucleotide polymorphism markers in allotetraploid rapeseed (Brassica napus L.).Theor Appl Genet. 2009 Nov;119(7):1301-11. doi: 10.1007/s00122-009-1135-x. Theor Appl Genet. 2009. PMID: 19756476
-
The New Is Old: Novel Germination Strategy Evolved From Standing Genetic Variation in Weedy Rice.Front Plant Sci. 2021 Jun 21;12:699464. doi: 10.3389/fpls.2021.699464. eCollection 2021. Front Plant Sci. 2021. PMID: 34234803 Free PMC article.
-
Identifying Genomic Regions Targeted During Eggplant Domestication Using Transcriptome Data.J Hered. 2021 Nov 1;112(6):519-525. doi: 10.1093/jhered/esab035. J Hered. 2021. PMID: 34130314 Free PMC article.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources
Other Literature Sources