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. 2007 Nov 7;2(11):e1124.
doi: 10.1371/journal.pone.0001124.

How global is the global biodiversity information facility?

Affiliations

How global is the global biodiversity information facility?

Chris Yesson et al. PLoS One. .

Abstract

There is a concerted global effort to digitize biodiversity occurrence data from herbarium and museum collections that together offer an unparalleled archive of life on Earth over the past few centuries. The Global Biodiversity Information Facility provides the largest single gateway to these data. Since 2004 it has provided a single point of access to specimen data from databases of biological surveys and collections. Biologists now have rapid access to more than 120 million observations, for use in many biological analyses. We investigate the quality and coverage of data digitally available, from the perspective of a biologist seeking distribution data for spatial analysis on a global scale. We present an example of automatic verification of geographic data using distributions from the International Legume Database and Information Service to test empirically, issues of geographic coverage and accuracy. There are over 1/2 million records covering 31% of all Legume species, and 84% of these records pass geographic validation. These data are not yet a global biodiversity resource for all species, or all countries. A user will encounter many biases and gaps in these data which should be understood before data are used or analyzed. The data are notably deficient in many of the world's biodiversity hotspots. The deficiencies in data coverage can be resolved by an increased application of resources to digitize and publish data throughout these most diverse regions. But in the push to provide ever more data online, we should not forget that consistent data quality is of paramount importance if the data are to be useful in capturing a meaningful picture of life on Earth.

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Conflict of interest statement

Competing Interests: WA Gray is a member of the UK delegation of voting participants on the governing board of GBIF. FA Bisby & RJ White are part of the Species 2000 delegation which is an Associate participant on the governing board of GBIF.

Figures

Figure 1
Figure 1. All valid points collected from GBIF database
Figure 2
Figure 2. GBIF points classified ‘In the sea’
Figure 3
Figure 3. GBIF points classified ‘Lat/Long error’
Figure 4
Figure 4. GBIF points classified ‘Lat/Long exactly zero’
Figure 5
Figure 5. GBIF points classified ‘Near valid’
Figure 6
Figure 6. GBIF points classified ‘Far from valid’
Figure 7
Figure 7. The top 10 data suppliers of Legume records
Figure 8
Figure 8. The top 10 data suppliers of Legume species
Figure 9
Figure 9. Global Legume coverage from GBIF data per TDWG level 4 area.
Figure 10
Figure 10. Species coverage on GBIF at a continental scale (TDWG level 1 continents).
Figure 11
Figure 11. Hypothetical example of a point near a coastline which cross the land/sea barrier when referenced on grids of ¼, ½, and 1 degree resolution.
Co-ordinates are displayed by points.

References

    1. Bisby FA. The quiet revolution: Biodiversity informatics and the internet. Science. 2000;289:2309–2312. - PubMed
    1. Edwards JL. Research and societal benefits of the Global Biodiversity Information Facility. Bioscience. 2004;54:485–486.
    1. Lane MA. Copenhagen: Global Biodiversity Information Facility; 2007. p. 87. GBIF Strategic and Operational Plans 2007–2011: From Prototype towards Full Operation-( http://www.gbif.org/GBIF_org/GBIF_Documents/strategic_plans.pdf).
    1. Wheeler QD. What if GBIF? Bioscience. 2004;54:717.
    1. Pennisi E. Taxonomic revival. Science. 2000;289:2306-+. - PubMed

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