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. 2008 Jan;36(Database issue):D170-2.
doi: 10.1093/nar/gkm1011. Epub 2007 Nov 13.

NONCODE v2.0: decoding the non-coding

Shunmin He  1 , Changning Liu, Geir Skogerbø, Haitao Zhao, Jie Wang, Tao Liu, Baoyan Bai, Yi Zhao, Runsheng Chen
Affiliations

NONCODE v2.0: decoding the non-coding

Shunmin He et al. Nucleic Acids Res. 2008 Jan.

Abstract

The NONCODE database is an integrated knowledge database designed for the analysis of non-coding RNAs (ncRNAs). Since NONCODE was first released 3 years ago, the number of known ncRNAs has grown rapidly, and there is growing recognition that ncRNAs play important regulatory roles in most organisms. In the updated version of NONCODE (NONCODE v2.0), the number of collected ncRNAs has reached 206 226, including a wide range of microRNAs, Piwi-interacting RNAs and mRNA-like ncRNAs. The improvements brought to the database include not only new and updated ncRNA data sets, but also an incorporation of BLAST alignment search service and access through our custom UCSC Genome Browser. NONCODE can be found under http://www.noncode.org or http://noncode.bioinfo.org.cn.

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Figures

Figure 1.
Figure 1.
Links between the NONCODE ncRNA annotations, the Genome Browser and NCBI. (A) The NONCODE database window with ncRNA annotations. (B) The corresponding NCBI annotation. (C) The corresponding Genome Browser window. (D) The link from Genome Browser to NONCODE.
See this image and copyright information in PMC

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