Structure and mechanisms of the DsbB-DsbA disulfide bond generation machine
- PMID: 18082634
- DOI: 10.1016/j.bbamcr.2007.11.006
Structure and mechanisms of the DsbB-DsbA disulfide bond generation machine
Abstract
All organisms possess specific cellular machinery that introduces disulfide bonds into proteins newly synthesized and transported out of the cytosol. In E. coli, the membrane-integrated DsbB protein cooperates with ubiquinone to generate a disulfide bond, which is transferred to DsbA, a periplasmic dithiol oxido-reductase that serves as the direct disulfide bond donor to proteins folding oxidatively in this compartment. Despite the extensive accumulation of knowledge on this oxidation system, molecular details of the DsbB reaction mechanisms had been controversial due partly to the lack of structural information until our recent determination of the crystal structure of a DsbA-DsbB-ubiquinone complex. In this review we discuss the structural and chemical nature of reaction intermediates in the DsbB catalysis and the illuminated molecular mechanisms that account for the de novo formation of a disulfide bond and its donation to DsbA. It is suggested that DsbB gains the ability to oxidize its specific substrate, DsbA, having very high redox potential, by undergoing a DsbA-induced rearrangement of cysteine residues. One of the DsbB cysteines that are now reduced then interacts with ubiquinone to form a charge transfer complex, leading to the regeneration of a disulfide at the DsbB active site, and the cycle can begin anew.
Similar articles
-
Critical role of a thiolate-quinone charge transfer complex and its adduct form in de novo disulfide bond generation by DsbB.Proc Natl Acad Sci U S A. 2006 Jan 10;103(2):287-92. doi: 10.1073/pnas.0507570103. Epub 2005 Dec 29. Proc Natl Acad Sci U S A. 2006. PMID: 16384917 Free PMC article.
-
Real-time monitoring of intermediates reveals the reaction pathway in the thiol-disulfide exchange between disulfide bond formation protein A (DsbA) and B (DsbB) on a membrane-immobilized quartz crystal microbalance (QCM) system.J Biol Chem. 2013 Dec 13;288(50):35969-81. doi: 10.1074/jbc.M113.519876. Epub 2013 Oct 21. J Biol Chem. 2013. PMID: 24145032 Free PMC article.
-
DsbB catalyzes disulfide bond formation de novo.J Biol Chem. 2002 Sep 6;277(36):32706-13. doi: 10.1074/jbc.M205433200. Epub 2002 Jun 18. J Biol Chem. 2002. PMID: 12072444
-
Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD, and CcdA.J Mol Biol. 2020 Aug 21;432(18):5091-5103. doi: 10.1016/j.jmb.2020.04.008. Epub 2020 Apr 16. J Mol Biol. 2020. PMID: 32305461 Free PMC article. Review.
-
Disulfide bond formation system in Escherichia coli.J Biochem. 2009 Nov;146(5):591-7. doi: 10.1093/jb/mvp102. Epub 2009 Jun 29. J Biochem. 2009. PMID: 19567379 Review.
Cited by
-
Structure analysis of the extracellular domain reveals disulfide bond forming-protein properties of Mycobacterium tuberculosis Rv2969c.Protein Cell. 2013 Aug;4(8):628-40. doi: 10.1007/s13238-013-3033-x. Epub 2013 Jul 5. Protein Cell. 2013. PMID: 23828196 Free PMC article.
-
Diversity of the Epsilonproteobacteria Dsb (disulfide bond) systems.Front Microbiol. 2015 Jun 9;6:570. doi: 10.3389/fmicb.2015.00570. eCollection 2015. Front Microbiol. 2015. PMID: 26106374 Free PMC article. Review.
-
Disulfide bond formation and cysteine exclusion in gram-positive bacteria.J Biol Chem. 2010 Jan 29;285(5):3300-9. doi: 10.1074/jbc.M109.081398. Epub 2009 Nov 24. J Biol Chem. 2010. PMID: 19940132 Free PMC article.
-
Interaction of Periplasmic Fab Production and Intracellular Redox Balance in Escherichia coli Affects Product Yield.ACS Synth Biol. 2022 Feb 18;11(2):820-834. doi: 10.1021/acssynbio.1c00502. Epub 2022 Jan 18. ACS Synth Biol. 2022. PMID: 35041397 Free PMC article.
-
Biogenesis, quality control, and structural dynamics of proteins as explored in living cells via site-directed photocrosslinking.Protein Sci. 2019 Jul;28(7):1194-1209. doi: 10.1002/pro.3627. Epub 2019 May 10. Protein Sci. 2019. PMID: 31002747 Free PMC article. Review.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases