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Review
. 2008;7(3):8.
doi: 10.1186/jbiol70. Epub 2008 Mar 7.

A Caenorhabditis elegans genetic-interaction map wiggles into view

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Review

A Caenorhabditis elegans genetic-interaction map wiggles into view

Kristin C Gunsalus. J Biol. 2008.

Abstract

Systematic mapping of genetic-interaction networks will provide an essential foundation for understanding complex genetic disorders, mechanisms of genetic buffering and principles of robustness and evolvability. A recent study of signaling pathways in Caenorhabditis elegans lays the next row of bricks in this foundation.

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Figures

Figure 1
Figure 1
Adapted from Byrne et al. [2], a superimposed network composed of different types of functional linkages contains subnetworks of genes that are highly interconnected based on one type of data: coexpression (blue), co-phenotype (green), or eukaryotic protein-protein interactions ('interolog'; purple). Byrne et al. found that these subnetworks were bridged by genetic interactions (pink) more often than expected by chance. Many such subnetworks were enriched for genes with shared functional annotations, supporting the idea that enhancing genetic interactions (identified by reduced function of a pair of genes) tend to bridge distinct functional modules.

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References

    1. Tong AH, Lesage G, Bader GD, Ding H, Xu H, Xin X, Young J, Berriz GF, Brost RL, Chang M, Chen Y, Cheng X, Chua G, Friesen H, Goldberg DS, Haynes J, Humphries C, He G, Hussein S, Ke L, Krogan N, Li Z, Levinson JN, Lu H, Ménard P, Munyana C, Parsons AB, Ryan O, Tonikian R, Roberts T, et al. Global mapping of the yeast genetic interaction network. Science. 2004;303:808–813. doi: 10.1126/science.1091317. - DOI - PubMed
    1. Byrne AB, Weirauch MT, Wong V, Koeva M, Dixon SJ, Stuart JM, Roy PJ. A global analysis of genetic interactions in Caenorhabditis elegans. J Biol. 2007;6:8. doi: 10.1186/jbiol58. - DOI - PMC - PubMed
    1. Giaever G, Chu AM, Ni L, Connelly C, Riles L, Véronneau S, Dow S, Lucau-Danila A, Anderson K, André B, Arkin AP, Astromoff A, El-Bakkoury M, Bangham R, Benito R, Brachat S, Campanaro S, Curtiss M, Davis K, Deutschbauer A, Entian KD, Flaherty P, Foury F, Garfinkel DJ, Gerstein M, Gotte D, Güldener U, Hegemann JH, Hempel S, Herman Z, et al. Functional profiling of the Saccharomyces cerevisiae genome. Nature. 2002;418:387–391. doi: 10.1038/nature00935. - DOI - PubMed
    1. Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, Gotta M, Kanapin A, Le Bot N, Moreno S, Sohrmann M, Welchman DP, Zipperlen P, Ahringer J. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature. 2003;421:231–237. doi: 10.1038/nature01278. - DOI - PubMed
    1. Rual JF, Ceron J, Koreth J, Hao T, Nicot AS, Hirozane-Kishikawa T, Vandenhaute J, Orkin SH, Hill DE, van den Heuvel S, Vidal M. Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. Genome Res. 2004;14:2162–2168. doi: 10.1101/gr.2505604. - DOI - PMC - PubMed

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