Next-generation DNA sequencing methods
- PMID: 18576944
- DOI: 10.1146/annurev.genom.9.081307.164359
Next-generation DNA sequencing methods
Abstract
Recent scientific discoveries that resulted from the application of next-generation DNA sequencing technologies highlight the striking impact of these massively parallel platforms on genetics. These new methods have expanded previously focused readouts from a variety of DNA preparation protocols to a genome-wide scale and have fine-tuned their resolution to single base precision. The sequencing of RNA also has transitioned and now includes full-length cDNA analyses, serial analysis of gene expression (SAGE)-based methods, and noncoding RNA discovery. Next-generation sequencing has also enabled novel applications such as the sequencing of ancient DNA samples, and has substantially widened the scope of metagenomic analysis of environmentally derived samples. Taken together, an astounding potential exists for these technologies to bring enormous change in genetic and biological research and to enhance our fundamental biological knowledge.
Similar articles
-
Applications of ultra-high-throughput sequencing.Methods Mol Biol. 2009;553:79-108. doi: 10.1007/978-1-60327-563-7_5. Methods Mol Biol. 2009. PMID: 19588102 Review.
-
Applications of next-generation sequencing technologies in functional genomics.Genomics. 2008 Nov;92(5):255-64. doi: 10.1016/j.ygeno.2008.07.001. Epub 2008 Aug 24. Genomics. 2008. PMID: 18703132 Review.
-
Next-generation sequencing and potential applications in fungal genomics.Methods Mol Biol. 2011;722:51-60. doi: 10.1007/978-1-61779-040-9_4. Methods Mol Biol. 2011. PMID: 21590412
-
Applications of new sequencing technologies for transcriptome analysis.Annu Rev Genomics Hum Genet. 2009;10:135-51. doi: 10.1146/annurev-genom-082908-145957. Annu Rev Genomics Hum Genet. 2009. PMID: 19715439 Review.
-
What can next generation sequencing do for you? Next generation sequencing as a valuable tool in plant research.Plant Biol (Stuttg). 2010 Nov;12(6):831-41. doi: 10.1111/j.1438-8677.2010.00373.x. Plant Biol (Stuttg). 2010. PMID: 21040298 Review.
Cited by
-
Quantitative trait locus analysis of body shape divergence in nine-spined sticklebacks based on high-density SNP-panel.Sci Rep. 2016 May 26;6:26632. doi: 10.1038/srep26632. Sci Rep. 2016. PMID: 27226078 Free PMC article.
-
Combining Partially Overlapping Multi-Omics Data in Databases Using Relationship Matrices.Front Plant Sci. 2020 Jul 14;11:947. doi: 10.3389/fpls.2020.00947. eCollection 2020. Front Plant Sci. 2020. PMID: 32765543 Free PMC article.
-
Translational genetics for diagnosis of human disorders of sex development.Annu Rev Genomics Hum Genet. 2013;14:371-92. doi: 10.1146/annurev-genom-091212-153417. Epub 2013 Jul 15. Annu Rev Genomics Hum Genet. 2013. PMID: 23875799 Free PMC article. Review.
-
Pyrosequencing as a tool for better understanding of human microbiomes.J Oral Microbiol. 2012;4. doi: 10.3402/jom.v4i0.10743. Epub 2012 Jan 23. J Oral Microbiol. 2012. PMID: 22279602 Free PMC article.
-
Molecular methods for somatic mutation testing in lung adenocarcinoma: EGFR and beyond.Transl Lung Cancer Res. 2015 Apr;4(2):126-41. doi: 10.3978/j.issn.2218-6751.2015.01.10. Transl Lung Cancer Res. 2015. PMID: 25870795 Free PMC article. Review.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Medical