Escherichia coli orfE (upstream of pyrE) encodes RNase PH
- PMID: 1885537
- PMCID: PMC208279
- DOI: 10.1128/jb.173.17.5589-5591.1991
Escherichia coli orfE (upstream of pyrE) encodes RNase PH
Abstract
RNase PH from extracts of Escherichia coli was purified to homogeneity and subjected to NH2-terminal sequencing. Comparison of this sequence with all open reading frames in the GenBank data base revealed at least 95% identity to an unidentified open reading frame (orfE) upstream of pyrE at 81.7 min on the E. coli chromosome. Clones of orfE overexpress RNase PH activity, verifying that orfE encodes this ribonuclease. We suggest that orfE be renamed rph.
Similar articles
-
Promiscuous exoribonucleases of Escherichia coli.J Bacteriol. 1993 Aug;175(15):4577-83. doi: 10.1128/jb.175.15.4577-4583.1993. J Bacteriol. 1993. PMID: 8335617 Free PMC article. Review. No abstract available.
-
Identification of the rph (RNase PH) gene of Bacillus subtilis: evidence for suppression of cold-sensitive mutations in Escherichia coli.J Bacteriol. 1992 Jul;174(14):4727-35. doi: 10.1128/jb.174.14.4727-4735.1992. J Bacteriol. 1992. PMID: 1624460 Free PMC article.
-
Overexpression and rapid purification of the orfE/rph gene product, RNase PH of Escherichia coli.J Biol Chem. 1992 Aug 25;267(24):17147-52. J Biol Chem. 1992. PMID: 1512252
-
Molecular and mutational analysis of three genes preceding pyrE on the Escherichia coli chromosome.Mol Microbiol. 1989 Mar;3(3):393-404. doi: 10.1111/j.1365-2958.1989.tb00184.x. Mol Microbiol. 1989. PMID: 2664418
-
The Escherichia coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels.J Bacteriol. 1993 Jun;175(11):3401-7. doi: 10.1128/jb.175.11.3401-3407.1993. J Bacteriol. 1993. PMID: 8501045 Free PMC article.
Cited by
-
Linkage map of Escherichia coli K-12, edition 10: the traditional map.Microbiol Mol Biol Rev. 1998 Sep;62(3):814-984. doi: 10.1128/MMBR.62.3.814-984.1998. Microbiol Mol Biol Rev. 1998. PMID: 9729611 Free PMC article. Review.
-
Promiscuous exoribonucleases of Escherichia coli.J Bacteriol. 1993 Aug;175(15):4577-83. doi: 10.1128/jb.175.15.4577-4583.1993. J Bacteriol. 1993. PMID: 8335617 Free PMC article. Review. No abstract available.
-
Identification of the rph (RNase PH) gene of Bacillus subtilis: evidence for suppression of cold-sensitive mutations in Escherichia coli.J Bacteriol. 1992 Jul;174(14):4727-35. doi: 10.1128/jb.174.14.4727-4735.1992. J Bacteriol. 1992. PMID: 1624460 Free PMC article.
-
Regulation of Bacterial Gene Expression by Transcription Attenuation.Microbiol Mol Biol Rev. 2019 Jul 3;83(3):e00019-19. doi: 10.1128/MMBR.00019-19. Print 2019 Aug 21. Microbiol Mol Biol Rev. 2019. PMID: 31270135 Free PMC article. Review.
-
Crystal structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis and implications for its quaternary structure and tRNA binding.Protein Sci. 2004 Mar;13(3):668-77. doi: 10.1110/ps.03477004. Epub 2004 Feb 6. Protein Sci. 2004. PMID: 14767080 Free PMC article.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Molecular Biology Databases