A single-tube, real-time PCR assay for detection of the two newly characterized human KI and WU polyomaviruses
- PMID: 18980861
- DOI: 10.1016/j.jcv.2008.09.006
A single-tube, real-time PCR assay for detection of the two newly characterized human KI and WU polyomaviruses
Abstract
Background: Three new human polyomaviruses have been recently described, and investigating their in vivo biology and pathogenicity will require sensitive and rational detection assays.
Objectives: To develop and evaluate a sensitive and rational assay for detection of the newly identified KI and WU polyomaviruses.
Study design: A single-tube, dual-probe, real-time PCR assay for simultaneous detection and discrimination of KI and WU polyomaviruses was developed.
Results: The assay had near single-molecule sensitivity for both viruses and no cross-reactivity was observed. A panel of 637 nasopharyngeal aspirates was screened, resulting in a frequency of 1.4% for KIPyV and 1.3% for WUPyV.
Conclusions: The dual-probe assay provides a rational approach for further studies of KIPyV and WUPyV.
Similar articles
-
Detection and discrimination of WU/KI polyomaviruses by real-time PCR with melting curve analysis.J Virol Methods. 2008 Oct;153(1):70-3. doi: 10.1016/j.jviromet.2008.06.018. Epub 2008 Jul 26. J Virol Methods. 2008. PMID: 18639584
-
Detection of BK, JC, WU, or KI polyomaviruses in faecal, urine, blood, cerebrospinal fluid and respiratory samples.J Clin Virol. 2009 Jul;45(3):249-54. doi: 10.1016/j.jcv.2009.05.002. Epub 2009 Jun 9. J Clin Virol. 2009. PMID: 19515607
-
KI polyomavirus detected in respiratory tract specimens from patients in St. Louis, Missouri.Pediatr Infect Dis J. 2010 Apr;29(4):329-33. doi: 10.1097/INF.0b013e3181c1795c. Pediatr Infect Dis J. 2010. PMID: 19949359
-
The human polyomaviruses KI and WU: virological background and clinical implications.APMIS. 2013 Aug;121(8):746-54. doi: 10.1111/apm.12091. Epub 2013 Jun 19. APMIS. 2013. PMID: 23782405 Review.
-
Human polyomaviruses and cancer: expanding repertoire.J Dtsch Dermatol Ges. 2008 Sep;6(9):704-8. doi: 10.1111/j.1610-0387.2008.06810.x. J Dtsch Dermatol Ges. 2008. PMID: 19000059 Review. English, German.
Cited by
-
Duplex real-time polymerase chain reaction assay for the detection of human KIPyV and WUPyV in nasopharyngeal aspirate pediatric samples.Mol Cell Probes. 2018 Aug;40:13-18. doi: 10.1016/j.mcp.2018.06.001. Epub 2018 Jun 5. Mol Cell Probes. 2018. PMID: 29883628 Free PMC article.
-
Whole-genome characterization and genotyping of global WU polyomavirus strains.J Virol. 2010 Jun;84(12):6229-34. doi: 10.1128/JVI.02658-09. Epub 2010 Mar 31. J Virol. 2010. PMID: 20357093 Free PMC article.
-
Real time PCR TaqMan assays for detection of polyomaviruses KIV and WUV in clinical samples.J Virol Methods. 2009 Dec;162(1-2):69-74. doi: 10.1016/j.jviromet.2009.07.016. Epub 2009 Jul 29. J Virol Methods. 2009. PMID: 19646480 Free PMC article.
-
The viral etiology of an influenza-like illness during the 2009 pandemic.J Med Virol. 2012 Jul;84(7):1071-9. doi: 10.1002/jmv.23265. J Med Virol. 2012. PMID: 22585724 Free PMC article.
-
The occurrence of polyomaviruses WUPyV and KIPyV among patients with severe respiratory infections.Braz J Microbiol. 2019 Jan;50(1):133-137. doi: 10.1007/s42770-018-0038-x. Epub 2018 Nov 30. Braz J Microbiol. 2019. PMID: 30637634 Free PMC article.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources