Investigation of candidate polymorphisms and disease activity in rheumatoid arthritis patients on methotrexate
- PMID: 19193698
- PMCID: PMC2681284
- DOI: 10.1093/rheumatology/ken513
Investigation of candidate polymorphisms and disease activity in rheumatoid arthritis patients on methotrexate
Abstract
Objectives: We examined the association between candidate single nucleotide polymorphisms (SNPs) and disease activity in RA patients on MTX.
Methods: Our population was drawn from the Brigham and Women's Hospital Rheumatoid Arthritis Sequential Study (BRASS), a prospective, observational cohort of RA patients. A total of 556 participants were genotyped using the Affymetrix 100K platform. Two hundred and sixty-two participants were on MTX therapy, including 120 on MTX monotherapy. The primary outcome was the disease activity score in 28 joints (DAS28-CRP). High disease activity was defined as DAS28-CRP >3.2. Low disease activity was defined as DAS28-CRP < or =3.2. We studied three candidate alleles in the ATIC, ITPA and MTHFR genes for association with DAS28-CRP.
Results: Among participants on MTX monotherapy, those carrying the minor allele of ATIC SNP rs4673993 were more likely to have low disease activity (P = 0.01). None of the other SNPs was associated with disease activity. Among patients on any MTX (combination or monotherapy), the minor allele of ATIC rs4673993 was also associated with low disease activity (P = 0.04).
Conclusions: In this cross-sectional analysis, ATIC SNP rs4673993 was associated with low disease activity in patients on MTX. Further studies are needed to clarify the relationship between ATIC polymorphisms, disease activity and treatment response.
Comment in
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Methotrexate pharmacogenomics in rheumatoid arthritis: introducing false-positive report probability.Rheumatology (Oxford). 2009 Jun;48(6):597-8. doi: 10.1093/rheumatology/kep060. Epub 2009 Apr 9. Rheumatology (Oxford). 2009. PMID: 19359345 No abstract available.
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Comment on: Investigation of candidate polymorphisms and disease activity in rheumatoid arthritis patients on methotrexate.Rheumatology (Oxford). 2009 Sep;48(9):1176-7; author reply 1177. doi: 10.1093/rheumatology/kep201. Epub 2009 Jul 13. Rheumatology (Oxford). 2009. PMID: 19602477 No abstract available.
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Comment on: Methotrexate pharmacogenomics in rheumatoid arthritis: introducing false positive report probability.Rheumatology (Oxford). 2009 Dec;48(12):1619-20; author reply 1620. doi: 10.1093/rheumatology/kep322. Epub 2009 Oct 14. Rheumatology (Oxford). 2009. PMID: 19828599 No abstract available.
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Do snapshot statistics fool us in MTX pharmacogenetic studies in arthritis research?Rheumatology (Oxford). 2010 Jun;49(6):1200-1. doi: 10.1093/rheumatology/kep445. Epub 2010 Jan 27. Rheumatology (Oxford). 2010. PMID: 20110251 No abstract available.
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References
-
- Weinblatt ME, Kaplan H, Germain BF, et al. Methotrexate in rheumatoid arthritis. A five-year prospective multicenter study. Arthritis Rheum. 1994;37:1492–8. - PubMed
-
- Kinder AJ, Hassell AB, Brand J, Brownfield A, Grove M, Shadforth MF. The treatment of inflammatory arthritis with methotrexate in clinical practice: treatment duration and incidence of adverse drug reactions. Rheumatology. 2005;44:61–6. - PubMed
-
- Dervieux T, Furst D, Lein DO, et al. Polyglutamation of methotrexate with common polymorphisms in reduced folate carrier, aminoimidazole carboxamide ribonucleotide transformylase, and thymidylate synthase are associated with methotrexate effects in rheumatoid arthritis. Arthritis Rheum. 2004;50:2766–74. - PubMed
-
- Wessels JA, Kooloos WM, De Jonge R, et al. Relationship between genetic variants in the adenosine pathway and outcome of methotrexate treatment in patients with recent-onset rheumatoid arthritis. Arthritis Rheum. 2006;54:2830–9. - PubMed
-
- Wessels JA, van der Kooij SM, le Cessie S, et al. A clinical pharmacogenetic model to predict the efficacy of methotrexate monotherapy in recent-onset rheumatoid arthritis. Arthritis Rheum. 2007;56:1765–75. - PubMed
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