An extracellular polyhydroxybutyrate depolymerase in Thermus thermophilus HB8
- PMID: 19214501
- DOI: 10.1007/s00253-008-1842-2
An extracellular polyhydroxybutyrate depolymerase in Thermus thermophilus HB8
Abstract
The thermophilic bacterium Thermus thermophilus HB8 has been characterized as a polyhydroxybutyrate (PHB)-degrading microorganism since it grows efficiently and forms clear zones on agar plates containing PHB as sole carbon source. T. thermophilus extracellular PHB depolymerase was purified to homogeneity using an affinity chromatography protocol. The purified enzyme was estimated to have an apparent molecular mass of 42 kDa. The extracellular PHB depolymerase gene was identified as the TTHA0199 gene product of T. thermophilus HB8. The amino acid sequence of the TTHA0199 gene product shared significant homologies to other carboxylesterases. A catalytic triad was identified consisting of S(183), E(310), and H(405). A pentapeptide sequence (GX(1)SX(2)G) exists within the molecule, characteristic for PHB depolymerases (lipase box) and for other serine hydrolases. Purified extracellular PHB depolymerase was stable at high temperatures with an optimum activity at pH 8.0. The apparent Km value of the purified enzyme for PHB was 53 microg/ml. As the main product of the enzymic hydrolysis of PHB, the monomer 3-hydroxybutyrate was identified, suggesting that the enzyme acts principally as an exo-type hydrolase.
Similar articles
-
Thermotolerant poly(3-hydroxybutyrate)-degrading bacteria from hot compost and characterization of the PHB depolymerase of Schlegelella sp. KB1a.Arch Microbiol. 2004 Oct;182(2-3):157-64. doi: 10.1007/s00203-004-0684-2. Epub 2004 Aug 31. Arch Microbiol. 2004. PMID: 15340791
-
Isolation of a Gram-positive poly(3-hydroxybutyrate) (PHB)-degrading bacterium from compost, and cloning and characterization of a gene encoding PHB depolymerase of Bacillus megaterium N-18-25-9.FEMS Microbiol Lett. 2006 Nov;264(2):152-9. doi: 10.1111/j.1574-6968.2006.00448.x. FEMS Microbiol Lett. 2006. PMID: 17064368
-
Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei.J Mol Biol. 2008 Oct 24;382(5):1184-94. doi: 10.1016/j.jmb.2008.07.078. Epub 2008 Aug 5. J Mol Biol. 2008. PMID: 18706425
-
Intracellular degradation of poly(3-hydroxybutyrate) granules of Zoogloea ramigera I-16-M.FEMS Microbiol Rev. 1992 Dec;9(2-4):333-8. doi: 10.1016/0378-1097(92)90327-k. FEMS Microbiol Rev. 1992. PMID: 1476778 Review.
-
Degradation of microbial polyesters.Biotechnol Lett. 2004 Aug;26(15):1181-9. doi: 10.1023/B:BILE.0000036599.15302.e5. Biotechnol Lett. 2004. PMID: 15289671 Review.
Cited by
-
Sustainable production and degradation of plastics using microbes.Nat Microbiol. 2023 Dec;8(12):2253-2276. doi: 10.1038/s41564-023-01529-1. Epub 2023 Nov 29. Nat Microbiol. 2023. PMID: 38030909 Review.
-
The structure of PhaZ7 at atomic (1.2 A) resolution reveals details of the active site and suggests a substrate-binding mode.Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jun 1;66(Pt 6):648-54. doi: 10.1107/S174430911001434X. Epub 2010 May 25. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010. PMID: 20516591 Free PMC article.
-
Production of Biodegradable Polymer from Agro-Wastes in Alcaligenes sp. and Pseudomonas sp.Molecules. 2021 Apr 22;26(9):2443. doi: 10.3390/molecules26092443. Molecules. 2021. PMID: 33922162 Free PMC article.
-
Can bioplastics always offer a truly sustainable alternative to fossil-based plastics?Microb Biotechnol. 2024 Apr;17(4):e14458. doi: 10.1111/1751-7915.14458. Microb Biotechnol. 2024. PMID: 38568795 Free PMC article.
-
Purification and characterization of extracellular PHB depolymerase enzyme from Aeromonas caviae Kuk1-(34) and their biodegradation studies with polymer films.Biodegradation. 2024 Apr;35(2):137-153. doi: 10.1007/s10532-023-10051-4. Epub 2023 Aug 28. Biodegradation. 2024. PMID: 37639167
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Research Materials