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Review
. 2009 Nov;85(2):265-76.
doi: 10.1007/s00253-009-2233-z. Epub 2009 Sep 16.

Achievements and new knowledge unraveled by metagenomic approaches

Affiliations
Review

Achievements and new knowledge unraveled by metagenomic approaches

Carola Simon et al. Appl Microbiol Biotechnol. 2009 Nov.

Abstract

Metagenomics has paved the way for cultivation-independent assessment and exploitation of microbial communities present in complex ecosystems. In recent years, significant progress has been made in this research area. A major breakthrough was the improvement and development of high-throughput next-generation sequencing technologies. The application of these technologies resulted in the generation of large datasets derived from various environments such as soil and ocean water. The analyses of these datasets opened a window into the enormous phylogenetic and metabolic diversity of microbial communities living in a variety of ecosystems. In this way, structure, functions, and interactions of microbial communities were elucidated. Metagenomics has proven to be a powerful tool for the recovery of novel biomolecules. In most cases, functional metagenomics comprising construction and screening of complex metagenomic DNA libraries has been applied to isolate new enzymes and drugs of industrial importance. For this purpose, several novel and improved screening strategies that allow efficient screening of large collections of clones harboring metagenomes have been introduced.

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Figures

Fig. 1
Fig. 1
Strategies for recovery of novel biomolecules

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References

    1. Abe T, Kanaya S, Kinouchi M, Ichiba Y, Kozuki T, Ikemura T. Informatics for unveiling hidden genome signatures. Genome Res. 2003;13:693–702. - PMC - PubMed
    1. Abe T, Sugawara H, Kinouchi M, Kanaya S, Ikemura T. Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples. DNA Res. 2005;12:281–290. - PubMed
    1. Abulencia CB, Wyborski DL, Garcia JA, Podar M, Chen W, Chang SH, Chang HW, Watson D, Brodie EL, Hazen TC, Keller M. Environmental whole-genome amplification to access microbial populations in contaminated sediments. Appl Environ Microbiol. 2006;72:3291–3301. - PMC - PubMed
    1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol. 1990;215:403–410. - PubMed
    1. Angly FE, Felts B, Breitbart M, Salamon P, Edwards RA, Carlson C, Chan AM, Haynes M, Kelley S, Liu H, Mahaffy JM, Mueller JE, Nulton J, Olson R, Parsons R, Rayhawk S, Suttle CA, Rohwer F. The marine viromes of four oceanic regions. PLoS Biol. 2006;4:e368. - PMC - PubMed